Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_4415 |
Symbol | |
ID | 6977509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 45233 |
End bp | 45901 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643393594 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_002278412 |
Protein GI | 209546494 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTCT TGCGTCCGAA ATACATCACC TTCGACTGCT ACGGCACGCT GACTAATTTC CAGATGGCGG AGGCGGCCCG CGACCTTTAC GGCAACCAGC TCGACGAGCC GCGCATGGCC GAGTTCGTCC GCAACTTCGC CGCCTATCGC CTCGATGAGG TTCTGGGCAA CTGGAAGCCC TATGCCGAGG TCGTTCACAA TTCGATCGAG CGCAGCTGCA AACGTAATGG CATCAAGTTC AGGGATGAAG ACGCCCGCAT GGTCTATGAG CGGGTGCCGA CCTGGGGGCC GCATGCGGAT GTGCCGGCTG GCCTTGCGAA GGTCGCCAAG GAGATCCCGC TGGTGATCCT ATCGAACGCG ATGAATTCGC AGATCATGTC GAATGTCGAA AAGCTCGGGG CGCCCTTCCA TGCGGTCTAT ACCGCAGAAC AGGCACAGGC CTACAAGCCG CGCCTGCAGG CCTTTGAATA TATGTTCGAC ATGCTCGGCT GCGCGCCTGA GGATGTCGTG CACTGCTCCT CGTCGTTCCG CTACGACCAT ATGTCGGCCA ACGATATCGG CATCAAGAAC AAGGTGTGGG TGAACCGCCG CCATGAACCC GCCAACCCGT TCTATGGTTA TGTCGAAATC CCAGACATCT CCGGCCTGCC CGGTGTTTTC GGTCTCTGA
|
Protein sequence | MTLLRPKYIT FDCYGTLTNF QMAEAARDLY GNQLDEPRMA EFVRNFAAYR LDEVLGNWKP YAEVVHNSIE RSCKRNGIKF RDEDARMVYE RVPTWGPHAD VPAGLAKVAK EIPLVILSNA MNSQIMSNVE KLGAPFHAVY TAEQAQAYKP RLQAFEYMFD MLGCAPEDVV HCSSSFRYDH MSANDIGIKN KVWVNRRHEP ANPFYGYVEI PDISGLPGVF GL
|
| |