Gene Rleg2_4382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_4382 
Symbol 
ID6977476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp11563 
End bp12330 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID643393562 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002278380 
Protein GI209546462 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0363369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCC GTGGAGCAAG TTTCATCGTC ACCGGCGGCG GCTCGGGGCT GGGTGCGGCG 
ACAACGCGTG CGCTCGTCGA GGCCGGCGGG CGCGTGACGA TCGTCGATCT CAATGCCGAA
GCGGGCGAAG AGATCGCCCG GCAATTCGGC AGCGACGCGC GCTTCGTCAA GGCGGATGTG
ACCGATGGCG AGGCGGCAAC GGCAGTGGTT GCGGCCGCGG TCGAAGCGTT CGGCGGCTTG
CGCGGATTGG TGAATTGCGC CGGTGTCGCG CCTGCCGAAA AGGTGATCGG CCGCGACGGG
CCGCACCGGC TGGAGAGTTT TGCACGCACC ATCGGCATCA ATCTCATCGG CACGTTCAAC
ATGATCCGGC TTGCCGCCGC CGCAATCCAG AATGCGGAGC CGGACGCGGA AGGCGAACGC
GGCGTCATCG TCAATACGGC TTCGGTTGCC GCCTTCGACG GCCAGATCGG CCAGGCCGCC
TATGCCGCCT CCAAGGGCGG GGTGGCAGCG ATGACCCTGC CGATCGCCCG CGAGCTTGCC
CGTTACGGCA TTCGCGTCGT CTCGATCGCG CCCGGCATTT TCGAGACGCC GATGATGGCC
GGTATGCCGG GCGAGGTACA GGCCGCACTC GGCAAGAGCG TGCCCTTTCC GCCGCGGCTC
GGCCGGCCGG CGGAATTTGC CGGGCTGGTG CGCCATATCG TTGAAAACAA CATGCTGAAC
GGCGAGGTCA TCCGCCTCGA CGGCGCATTG CGGATGGGCG CGCGTTGA
 
Protein sequence
MLIRGASFIV TGGGSGLGAA TTRALVEAGG RVTIVDLNAE AGEEIARQFG SDARFVKADV 
TDGEAATAVV AAAVEAFGGL RGLVNCAGVA PAEKVIGRDG PHRLESFART IGINLIGTFN
MIRLAAAAIQ NAEPDAEGER GVIVNTASVA AFDGQIGQAA YAASKGGVAA MTLPIARELA
RYGIRVVSIA PGIFETPMMA GMPGEVQAAL GKSVPFPPRL GRPAEFAGLV RHIVENNMLN
GEVIRLDGAL RMGAR