| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6027 |
|---|
| Symbol | |
|---|
| ID | 6977413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011366 |
|---|
| Strand | - |
|---|
| Start bp | 455421 |
|---|
| End bp | 456449 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643393479 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_002278297 |
|---|
| Protein GI | 209546407 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0254846 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.41211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGTC CGACCATTTC CGATCTTGCC CGCGCCTCCG GCGTCAGCGT CGCCACCGTC
GATAGGGTTC TCAATGCCCG CCACCGCGTG CGGGAGGAGA CGGCGCGGCG GGTCTATGAT
GCGGCCCAGC AGATCGGCTA CCACGCCGTC GGCCTGATCC GGCAGCGGGT CTTCGAGGAT
CTGCCGCAAT ATAAGCTGGC TTTCCTGCTG CAGAAACCGA CGCAGTCCTT CTACCAGAGC
TTCGTGCGCG AGATCGAAAC CGCAGCGCGT GCGGTGACGA CCGCGCGCAT ACAGACGCAG
ATCGACTTTC CCTCCGCCGC AACACCGGCG GCGATCGTCG AGAAGATCAG GACGCTCGCC
GCCCGCAATC AGGCCGTTGC TCTCGTCGGC CCGGATTATC CGGCGGTGAC GACGGCGGTC
GAGGAATTGA AGGAGCGCGG CATTCCCGTC TTCTCGCTGC TCTCCGATCT CGCCACCGGC
GTGCGCGATG CCTATGTCGG CGTCAACAAC CGCAAGGTCG GGCGCACCGC CGCCTGGACG
ATTGCGCGAA CGGCGCGCAA GCCCGGCAAG GTCGCCTGTT TCGTCGGCAG CCACCGCTTC
CACGGCCATG AATTGCGGGA GATCGGTTTT CGCTCCTATT TCCGCGAGAA TGCGCCGGAA
TTCGACGTCC TGGATACGCT GATCAACCTC GAGACCGCCG AGATCACCCA TGAGGCGACG
CTGACGCTGC TGCAGAAACA TCCCGATCTC GTCGGCCTCT ATGTCTGCGG CGGCGGCATG
GAGGGGGCGA TTTCCGCGTT CCGCGAAGAG AATGTCGATG GCCGGATCGT GCTTGTCGTC
AACGAGCTGA CGCCGGAGAG CAAGGCCGGC CTCGCCGACG AGATCGTCAC CATGGTGGTC
GCGACGCCGC TGCCCGCTCT CTGCAAAGAG CTTTTGTCGC TGATGGTCGG CGCGATCGAG
CATGGGGAGG CGGCCGTTCC CGGCCAATCC TTCCTGCCTT TCGACATCTA CATCTCGGAG
AATATCTGA
|
|---|
| Protein sequence | MRRPTISDLA RASGVSVATV DRVLNARHRV REETARRVYD AAQQIGYHAV GLIRQRVFED
LPQYKLAFLL QKPTQSFYQS FVREIETAAR AVTTARIQTQ IDFPSAATPA AIVEKIRTLA
ARNQAVALVG PDYPAVTTAV EELKERGIPV FSLLSDLATG VRDAYVGVNN RKVGRTAAWT
IARTARKPGK VACFVGSHRF HGHELREIGF RSYFRENAPE FDVLDTLINL ETAEITHEAT
LTLLQKHPDL VGLYVCGGGM EGAISAFREE NVDGRIVLVV NELTPESKAG LADEIVTMVV
ATPLPALCKE LLSLMVGAIE HGEAAVPGQS FLPFDIYISE NI
|
|---|
| |