Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5977 |
Symbol | |
ID | 6977363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011366 |
Strand | + |
Start bp | 394975 |
End bp | 395670 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643393429 |
Product | Helix-turn-helix type 11 domain protein |
Protein accession | YP_002278247 |
Protein GI | 209546357 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.374689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCT CCGAACGCCT CCTCGACCTT CTTCAGGTAT TGCGCCGCCA CCGTCGGCCG GTGAGTGGCG GCGTGCTGGC CGACGAGATC GGCGTCAGTA TCCGCACCCT CTATCGGGAT ATTGCCAGCC TTCAGGCCCA GGGCGCGGCG ATCGAGGGCG AACCGGGTGT CGGTTATATC TTGAAACCGG GATTTCTCCT GCCGCCGCTG ATGTTTCCGC CGGAGGAGAT CGAAGCGCTC GTCCTCGGTT CGCGATGGGT CGCGGATAGA GGGGACGATC ACTTGCGCGA TGCGGCGCGA AATGCGCTGG CGCGGATTGC CGCCGTGCTG CCGCCCGAAT TGCGCGACGC ACTGGATGCA TCCGCCCTCC TGGTGGGGCC TGGCGTCAAA CTCCCTGTCG ACCAGGTCGA TCCGGCGCTT CTGCGCAAGG CGATCCGCAC CGAACGCAAG CTTTTGATCT TCTATAGCGA CGGAGCCGGC GTGGCGTCGG AGCGTGTGGT GTGGCCGTTC GCGCTCGCTT TTTTTGACCA GGTGCGCCTC CTCCTCGGCT GGTGCGAACT CCGCCAGGAT TTCCGCTCGT TTCGCACGGA TCGAATTGTC CATGCGCAAG TGCTCGACGC CCGGTATCCC AAGCGCAGGC AGGCGCTGTT GAAACAATGG CGGGAGGTCC AGGGAATATC GCATCGCGAC GTATGA
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Protein sequence | MSRSERLLDL LQVLRRHRRP VSGGVLADEI GVSIRTLYRD IASLQAQGAA IEGEPGVGYI LKPGFLLPPL MFPPEEIEAL VLGSRWVADR GDDHLRDAAR NALARIAAVL PPELRDALDA SALLVGPGVK LPVDQVDPAL LRKAIRTERK LLIFYSDGAG VASERVVWPF ALAFFDQVRL LLGWCELRQD FRSFRTDRIV HAQVLDARYP KRRQALLKQW REVQGISHRD V
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