Gene Rleg2_5977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5977 
Symbol 
ID6977363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp394975 
End bp395670 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID643393429 
ProductHelix-turn-helix type 11 domain protein 
Protein accessionYP_002278247 
Protein GI209546357 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.374689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCT CCGAACGCCT CCTCGACCTT CTTCAGGTAT TGCGCCGCCA CCGTCGGCCG 
GTGAGTGGCG GCGTGCTGGC CGACGAGATC GGCGTCAGTA TCCGCACCCT CTATCGGGAT
ATTGCCAGCC TTCAGGCCCA GGGCGCGGCG ATCGAGGGCG AACCGGGTGT CGGTTATATC
TTGAAACCGG GATTTCTCCT GCCGCCGCTG ATGTTTCCGC CGGAGGAGAT CGAAGCGCTC
GTCCTCGGTT CGCGATGGGT CGCGGATAGA GGGGACGATC ACTTGCGCGA TGCGGCGCGA
AATGCGCTGG CGCGGATTGC CGCCGTGCTG CCGCCCGAAT TGCGCGACGC ACTGGATGCA
TCCGCCCTCC TGGTGGGGCC TGGCGTCAAA CTCCCTGTCG ACCAGGTCGA TCCGGCGCTT
CTGCGCAAGG CGATCCGCAC CGAACGCAAG CTTTTGATCT TCTATAGCGA CGGAGCCGGC
GTGGCGTCGG AGCGTGTGGT GTGGCCGTTC GCGCTCGCTT TTTTTGACCA GGTGCGCCTC
CTCCTCGGCT GGTGCGAACT CCGCCAGGAT TTCCGCTCGT TTCGCACGGA TCGAATTGTC
CATGCGCAAG TGCTCGACGC CCGGTATCCC AAGCGCAGGC AGGCGCTGTT GAAACAATGG
CGGGAGGTCC AGGGAATATC GCATCGCGAC GTATGA
 
Protein sequence
MSRSERLLDL LQVLRRHRRP VSGGVLADEI GVSIRTLYRD IASLQAQGAA IEGEPGVGYI 
LKPGFLLPPL MFPPEEIEAL VLGSRWVADR GDDHLRDAAR NALARIAAVL PPELRDALDA
SALLVGPGVK LPVDQVDPAL LRKAIRTERK LLIFYSDGAG VASERVVWPF ALAFFDQVRL
LLGWCELRQD FRSFRTDRIV HAQVLDARYP KRRQALLKQW REVQGISHRD V