Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5949 |
Symbol | |
ID | 6977335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011366 |
Strand | - |
Start bp | 363238 |
End bp | 363906 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643393401 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002278219 |
Protein GI | 209546329 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.426102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0201858 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTACA AGCTGGATTT CACCCCTGTT ATCGACGGGC TGCCGAGCCT GCTGCTCGGT TGTCTCGGGA CCTTCCTGCT GGCCATTTGC GGAATGCTGC TGGCGATCGT CATCGGGATC GGCGGGGTTG CCCTGCGCGA CTCCGCGCTC AAACCCTTGC GGTGGCTGGT TATCGCCTTC GTCGAGCTGA TCCGCAACAC GCCGTTCCTG GTGCAGATCT TTTTCATCTA TTTCGCGCTT CCGCTCACCG GCATCCGGCT GGATCCGACG CCGACGGCGA TCATCGCGCT CGGCATCAAC GGCGGCGCTT ACGCGATCGA GATCATTCGC GGCGGCGTTC AGTCGATCCC GAAGGGGCAA ATGGAAGCCG GCCTGGCGCT TGGCCTGCAC AAGGCGCAGG TGTTCCGGTT GATCATCCTC AAGCCGGCCC TGCGGGCGAT CTATCCGTCG CTGACCAGCC AGTTCGTGCT GTTGACGCTG ACCACCAGCA TTGCATCGGC GATCTCGGCC TATGAGCTGA CCTCCGTTTC CCAGCGCATC GAATCGGAGA GCTTCCGCAG CTTCGAGGTC TATTTCACGG TCACGCTTTT CTATTTCGTG ATTTCCTGGG TGATGATGCG CCTGTTTGCG GCGTTTTCCG CCCGCTATTT CAAATATCCC GTCAAGTAG
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Protein sequence | MNYKLDFTPV IDGLPSLLLG CLGTFLLAIC GMLLAIVIGI GGVALRDSAL KPLRWLVIAF VELIRNTPFL VQIFFIYFAL PLTGIRLDPT PTAIIALGIN GGAYAIEIIR GGVQSIPKGQ MEAGLALGLH KAQVFRLIIL KPALRAIYPS LTSQFVLLTL TTSIASAISA YELTSVSQRI ESESFRSFEV YFTVTLFYFV ISWVMMRLFA AFSARYFKYP VK
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