Gene Rleg2_5949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5949 
Symbol 
ID6977335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp363238 
End bp363906 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content60% 
IMG OID643393401 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002278219 
Protein GI209546329 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.426102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0201858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTACA AGCTGGATTT CACCCCTGTT ATCGACGGGC TGCCGAGCCT GCTGCTCGGT 
TGTCTCGGGA CCTTCCTGCT GGCCATTTGC GGAATGCTGC TGGCGATCGT CATCGGGATC
GGCGGGGTTG CCCTGCGCGA CTCCGCGCTC AAACCCTTGC GGTGGCTGGT TATCGCCTTC
GTCGAGCTGA TCCGCAACAC GCCGTTCCTG GTGCAGATCT TTTTCATCTA TTTCGCGCTT
CCGCTCACCG GCATCCGGCT GGATCCGACG CCGACGGCGA TCATCGCGCT CGGCATCAAC
GGCGGCGCTT ACGCGATCGA GATCATTCGC GGCGGCGTTC AGTCGATCCC GAAGGGGCAA
ATGGAAGCCG GCCTGGCGCT TGGCCTGCAC AAGGCGCAGG TGTTCCGGTT GATCATCCTC
AAGCCGGCCC TGCGGGCGAT CTATCCGTCG CTGACCAGCC AGTTCGTGCT GTTGACGCTG
ACCACCAGCA TTGCATCGGC GATCTCGGCC TATGAGCTGA CCTCCGTTTC CCAGCGCATC
GAATCGGAGA GCTTCCGCAG CTTCGAGGTC TATTTCACGG TCACGCTTTT CTATTTCGTG
ATTTCCTGGG TGATGATGCG CCTGTTTGCG GCGTTTTCCG CCCGCTATTT CAAATATCCC
GTCAAGTAG
 
Protein sequence
MNYKLDFTPV IDGLPSLLLG CLGTFLLAIC GMLLAIVIGI GGVALRDSAL KPLRWLVIAF 
VELIRNTPFL VQIFFIYFAL PLTGIRLDPT PTAIIALGIN GGAYAIEIIR GGVQSIPKGQ
MEAGLALGLH KAQVFRLIIL KPALRAIYPS LTSQFVLLTL TTSIASAISA YELTSVSQRI
ESESFRSFEV YFTVTLFYFV ISWVMMRLFA AFSARYFKYP VK