| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5943 |
|---|
| Symbol | |
|---|
| ID | 6977330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011366 |
|---|
| Strand | + |
|---|
| Start bp | 358530 |
|---|
| End bp | 359576 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643393396 |
|---|
| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
|---|
| Protein accession | YP_002278214 |
|---|
| Protein GI | 209546324 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0234266 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAT CGCCCTTCGA CCATCCCTTC CTCTCCGGCC TGCTCGGCGA CGATGAAATC
GCGCCCTATT TCTCCGCCGA GGCCGATATC CGCGCCATGC TCTCCTTCGA GGCCGCTTTG
GCGAGGGCCG AAGCCGCCCA TGGCCTGATC CCCGCCGAAG CCGCAAGACG GATCGCTGAA
ATCTGCGCCG GCTTCTCCGC CGATCTGCAT CGTCTGCGTG CGGCAACGGC AAGGGACGGC
GTCGTTGTTC CAGAGCTCAT CAAGCAGCTG CGCACCGAAG TCGGCGAAGA AGCGGCCAAA
AGCCTGCACC TCGGCGCCAC CAGCCAGGAT GTGATCGACA CCGGCCTGAT GATCCGCCTG
AAGGCGATAG TCTTCCTGTT TGCCGGCCGG CTTTCCGCCA TCGTCGCCGG GCTCGATGGG
CTCGATCGCC AGTTCGGCCG CAACCGGCTG ATGGGTCATA CCCGCATGCA GGCAGCCATC
CCGATTTCCG TCAGCGACCG CCTCGCTGCG TGGCGCGCGC CGTTGGAGAC CTATCGCGAC
CGCCTGACCG AGCAGAGCTT CCCCGTCCAG TTCGGCGGCG CCGCCGGCAC CCTCGACAAG
CTCGGGCCGC AAGGCCCCGC CATCCGCGCC GCGCTCGCCC AGGAACTCGG CCTGACCGAT
TGCAGGCAAT GGCAGAGCGA ACGTCTGCCG ATCGCCGATA TCGCCAGCCT GTTTGCCTCG
ATCTCGGGCA GCCTCGGCAA GATCGGCCAG GATATCGCTC TGCTTGCCCA GGCAGGCCAA
GAGATCGAAA TCGCGGGCGG CGGCACCTCC TCGGCAATGG CGCACAAACA GAACCCCGTC
GCCGCCGAAA CCCTGGTCTC GCTCGCCCGC TTCAACGCCA CGGCGCTCTC CGGCATCCAC
CAGTCCCTTG TCCATGAACA GGAACGCTCG GGTGCGGCCT GGACGCTCGA ATGGCTGCTG
CTGCCGCAAA TGACGATGGC AACCGCCGCC AGCCTGCGGC TGGCGGGGGA ACTGACGGGG
AATATCAAGC GGCTTGGAAC GGCCTAA
|
|---|
| Protein sequence | MTASPFDHPF LSGLLGDDEI APYFSAEADI RAMLSFEAAL ARAEAAHGLI PAEAARRIAE
ICAGFSADLH RLRAATARDG VVVPELIKQL RTEVGEEAAK SLHLGATSQD VIDTGLMIRL
KAIVFLFAGR LSAIVAGLDG LDRQFGRNRL MGHTRMQAAI PISVSDRLAA WRAPLETYRD
RLTEQSFPVQ FGGAAGTLDK LGPQGPAIRA ALAQELGLTD CRQWQSERLP IADIASLFAS
ISGSLGKIGQ DIALLAQAGQ EIEIAGGGTS SAMAHKQNPV AAETLVSLAR FNATALSGIH
QSLVHEQERS GAAWTLEWLL LPQMTMATAA SLRLAGELTG NIKRLGTA
|
|---|
| |