| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5903 |
|---|
| Symbol | |
|---|
| ID | 6977459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011366 |
|---|
| Strand | - |
|---|
| Start bp | 318913 |
|---|
| End bp | 320283 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643393356 |
|---|
| Product | glycoside hydrolase family 4 |
|---|
| Protein accession | YP_002278174 |
|---|
| Protein GI | 209546284 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.670067 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAA ATCCCAAGAT CACATTCATC GGAGCTGGCT CCACCGTTTT CATGAAGAAC
ATCATCGGCG ACGTTTTGCA GCGTCCCGCC CTTTCGGGCG CAACGATCGC GCTGATGGAT
CTCAACCCGC AGCGGCTTGA GGAAAGCGCC ATCGTCGTCA ACAAGCTGAT CTCGACGCTC
GGCGTCAAGG CCAAGGCCGA GACCTATTCC GACCAGCGCA AGGCGCTAGC CGGCGCCGAT
TTCGTCGTCG TCGCCTTCCA GATCGGCGGC TATGAGCCCT GCACCGTCAC CGATTTCGAA
GTGCCGAAGA AATACGGCCT GCGCCAGACG ATCGCCGATA CGCTCGGCGT CGGCGGCATC
ATGCGGGGCT TGCGCACCGT GCCGCATCTC TGGAAGGTCT GCGAGGATAT GCTCGCCGTC
TGCCCCGAGG CGATCATGCT GCAATATGTC AACCCGATGG CGATCAACAC CTGGGCGATC
TCCGAGAAAT ACCCGACCAT CAGCCAGGTC GGCCTCTGCC ATTCGGTGCA GGGCACGGCG
ATGGAGCTGG CCCATGACCT CGACATTCCC TACGAGGAAA TCCGCTACCG CGCGGCCGGC
ATCAACCACA TGGCCTTCTA TCTCAAATTC GAGCATCGCC AGGCCGACGG CTCCTACCGC
AATCTCTATC CCGATCTCGT GCGCGGCTAC CGCGAGGGCA GAGCGCCGAA GCCCGGCTGG
AACCCGCGCT GCCCGAACAA GGTGCGCTAC GAGATGCTGA CGCGGCTCGG CTATTTCGTC
ACCGAAAGCT CGGAGCATTT CGCCGAATAC ACGCCCTATT TCATCAAGGA AGGCCGCGAC
GACCTGATCG AGAAATTCGG CATTCCGCTC GATGAATATC CGAAACGCTG CATCGAGCAG
ATCGAGCGCT GGAAGGGCCA GGCGGAAGCC TATCGCAGCG CCGACAAGAT CGAGGTGACG
CCCTCGAAGG AATACGCTTC CTCGATCATC AACTCGGTCT GGACCGGCGA ACCCTCTGTC
ATTTACGGCA ATGTCCGCAA CAATGGCTGC ATCACCTCGC TGCCCGCCAA TTGCGCCGCC
GAAGTGCCCT GCCTCGTCGA CGCCTCCGGC ATCCAGCCGA CCTTCATCGG CGACCTGCCG
CCGCAGCTGA CCGCGCTGAT CCGCACCAAT ATCAACGTCC AGGAACTGAC GGTGCAGGCG
CTGATGACCG AAAATCGCGA GCACATCTAC CACGCCGCGA TGATGGACCC GCACACGGCC
GCCGAACTCG ACCTCGACCA GATTTGGTCG CTGGTCGACG ACCTGCTCGC CACCCACGGC
AACTGGCTGC CCGAATGGGC CCGCACATCT AGAAAAGTTC AAGCCGCCTG A
|
|---|
| Protein sequence | MAANPKITFI GAGSTVFMKN IIGDVLQRPA LSGATIALMD LNPQRLEESA IVVNKLISTL
GVKAKAETYS DQRKALAGAD FVVVAFQIGG YEPCTVTDFE VPKKYGLRQT IADTLGVGGI
MRGLRTVPHL WKVCEDMLAV CPEAIMLQYV NPMAINTWAI SEKYPTISQV GLCHSVQGTA
MELAHDLDIP YEEIRYRAAG INHMAFYLKF EHRQADGSYR NLYPDLVRGY REGRAPKPGW
NPRCPNKVRY EMLTRLGYFV TESSEHFAEY TPYFIKEGRD DLIEKFGIPL DEYPKRCIEQ
IERWKGQAEA YRSADKIEVT PSKEYASSII NSVWTGEPSV IYGNVRNNGC ITSLPANCAA
EVPCLVDASG IQPTFIGDLP PQLTALIRTN INVQELTVQA LMTENREHIY HAAMMDPHTA
AELDLDQIWS LVDDLLATHG NWLPEWARTS RKVQAA
|
|---|
| |