| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5885 |
|---|
| Symbol | |
|---|
| ID | 6977274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011366 |
|---|
| Strand | - |
|---|
| Start bp | 294006 |
|---|
| End bp | 294713 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643393340 |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_002278158 |
|---|
| Protein GI | 209546268 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGA CAATCGGGAG CACGGCGGAG GCCGTCTCCG AGATCGGCGA CGGCGCGACC
GTCATGATCG GTGGTTTCGG TGGCTCGGGC GCGCCGATCG AATTGATCCA TGCCCTGATC
GACAGGGGGC CGAAAAACCT CACCGTGATC AACAACAATG CGGGCAATGG GCGCATCGGC
ATTGCGGCGA TGATCGATGC CGGCATGGTC AGAAAGATGA TCTGCTCCTT CCCGCGCTCG
TCGGACCCGC GCGCTTTCAC TGACAAATAT CTGGCCGGCG AAATCGAGCT TGAACTGGTG
CCGCAGGGAA CGCTGGCCGA GCGCATCCGC GCCGGTGGGG CGGGCATTCC GGCTTTCTAC
ACGCCGACGG CCTATGGCAC GGAACTCGCT GACGGCAAGG TCATCGCCGA ATTCGACGGC
CGCCATTATG TGCAGGAACG TTGGCTGAAA GCCGATTTCG CCATCGTCAA AGCCGAGATC
GGCGATATCA ATGGCAACCT CACCTACAAC AAGGCCGGCC GCAACTTCAA TCCGCTGATG
TGCATGGCGG CGGCCAAGAC GATCGCCCAG GTTTCATCGA TCGTGCCGGC CGGCGGCATC
GATCCGGAGC ATGTGGTGAC ACCCGGCATC TTCGTCGACC GTGTCGTCGC CGTCTCCCAT
CCGCAGCAGG AAGAAGAACT CATTCGAGCC GGAGTGGCCT ACGTATGA
|
|---|
| Protein sequence | MDKTIGSTAE AVSEIGDGAT VMIGGFGGSG APIELIHALI DRGPKNLTVI NNNAGNGRIG
IAAMIDAGMV RKMICSFPRS SDPRAFTDKY LAGEIELELV PQGTLAERIR AGGAGIPAFY
TPTAYGTELA DGKVIAEFDG RHYVQERWLK ADFAIVKAEI GDINGNLTYN KAGRNFNPLM
CMAAAKTIAQ VSSIVPAGGI DPEHVVTPGI FVDRVVAVSH PQQEEELIRA GVAYV
|
|---|
| |