Gene Rleg2_5878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5878 
Symbol 
ID6977267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp286126 
End bp286920 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content65% 
IMG OID643393333 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002278151 
Protein GI209546261 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGAAC TTGCGCAATC GCTCGCATCG ATCAAACTGC CGGATCTCGC CGGCAAGGCC 
GTGCTGATCA CCGGCGCCTC CACAGGCATC GGGGCGGCGC TTGCCCGCGC CTTTGCGGCG
CAGGGGGCCA AGGTCGGCGT GCACTACAAT GCCAGCCGCG AGCCGGCGGA GGCGCTTGCC
GAGGAGATCA GGGCTGCCGG CGGCACTGTG CACCTGATCC AGGGCGATGT ATCCAGGGAA
GGCGAAACCG AGCGGGTCGT CGAGGAGACG GCGAAGACCT TCGGCCATCT CGACGGGCTG
ATCAACAATG CCGGCGGCAT GCTGGGGCGC AAACCGACCT CGGAATATAC CGATGCGCAT
TATGCCGCGG TCATGGATCT CAATGCCCGC TCGGTGCTGG CGGCAACGCG TGCCGCCCAT
CCCTGGCTGA AGAAGCAGGG CGGCTTCATC ATCAACACCA CCTCGATCGC CGCGCGCAAC
GGCGGCGGCA ACGGGGCGAT CCTTTATGCG GCATCGAAGG GCTTCGTCTC GACAATCACC
CGCGGCCATG CCAAGGAATT CGTCGCCGAC CGGATCCGGG TCAACGCGGT GGCGCCGGGT
GTCATCGCCA CGCCCTTCCA CGAGCGTTAT ACCAATGACG AGCAGATGGA GCTGCAGCGC
AAATCGATCC CGATGGGTTT CGTCGGCACA TCGGAGGATT GCGTCGGCGC CTATCTCTTC
CTCGCCTCGC CGACGCTGTC CGGCTACATC ACCGGCCAGA TCATCGAGGT CAATGGCGGC
CAGCTGATGC CGTAG
 
Protein sequence
MVELAQSLAS IKLPDLAGKA VLITGASTGI GAALARAFAA QGAKVGVHYN ASREPAEALA 
EEIRAAGGTV HLIQGDVSRE GETERVVEET AKTFGHLDGL INNAGGMLGR KPTSEYTDAH
YAAVMDLNAR SVLAATRAAH PWLKKQGGFI INTTSIAARN GGGNGAILYA ASKGFVSTIT
RGHAKEFVAD RIRVNAVAPG VIATPFHERY TNDEQMELQR KSIPMGFVGT SEDCVGAYLF
LASPTLSGYI TGQIIEVNGG QLMP