Gene Rleg2_5808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5808 
Symbol 
ID6977197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp218975 
End bp219787 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content60% 
IMG OID643393263 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_002278081 
Protein GI209546191 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.297329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0818645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAC GCGAACGCCA TCGCATCATC TTAAGCGCTG TTCAGGAAAA GTCCGTGGTG 
ACGATCCAGG ACATTGCCGA GCTGACGGAA GCTTCCGAAG CGACAATCCG GCGCGACATT
GCGGCTCTTC ATGTGCAGGG CAAGATCCGT CGCGTCCGCG GCGGCGCCGA AGCGGTGCAT
CCGCCGCAGC TCGGCAATCT TGCCGGCCGG CCCTTCCGGG TTTCAGAATC AGTCAACATC
GATAAAAAAC GTGCAATTGC CCGCGCAGCC GTCGATCTCT GCGAAGCGGG CGATGCCATC
ATCATCAATG GCGGCACGAC GACCTTCCAG ATGGTGCATT ACATGGCCGG CCATCGCCTG
CAGGTGATGA CCAATTCTTT TGCCATCGCC GAACATCTGG TCAAACATTC CAAAAACACG
GTGACAGTGC CGGGCGGCGC GATCTATCGC GAGCAGAGCC TGATCCTGTC GCCTTTCGAC
AATGACGCGA TCCGCAATTT TTATGCGCGG CGCATGTTCA TCGGCGCCCA GGGCGTCGGC
CCGCTCGGCA TCATGGAGGC GGATGCCCTG ATCATCCAGA GCGAGCAGAA GCTGATGCAC
CAGGCCGACG AACTCGTCGT CATGGTCGAT TCAAGCAAAT TCAATCGCCG GTCGAGCCTC
ATTCTCTGTG CGCTCGACCG CGTTTCTGTG GTCATCACCG ATGACGGGAT TTCGGACGAG
GCGGCTCGCA TGATCGAGAA TGCCGGCGTC CGGCTCGTTG TCGCAAGCCC GGTGGCCCAG
GCTGTGAGGG AGGATTCCTC GTCGGTCGCA TGA
 
Protein sequence
MHERERHRII LSAVQEKSVV TIQDIAELTE ASEATIRRDI AALHVQGKIR RVRGGAEAVH 
PPQLGNLAGR PFRVSESVNI DKKRAIARAA VDLCEAGDAI IINGGTTTFQ MVHYMAGHRL
QVMTNSFAIA EHLVKHSKNT VTVPGGAIYR EQSLILSPFD NDAIRNFYAR RMFIGAQGVG
PLGIMEADAL IIQSEQKLMH QADELVVMVD SSKFNRRSSL ILCALDRVSV VITDDGISDE
AARMIENAGV RLVVASPVAQ AVREDSSSVA