Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5781 |
Symbol | |
ID | 6977170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011366 |
Strand | + |
Start bp | 192552 |
End bp | 193529 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643393236 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002278054 |
Protein GI | 209546164 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.100059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTTCC TGCTTCGCCG CCTCGTTTTC TACATGGCAG CCTTCATCGC CGCAGCGACG ATCAATTTCT TCTTGCCGCG GCTGATGCCG GGCGATCCCG TGCAGATCAT GTTCTCGAGC GCCGGCACCG AATTGCCGCC GGAAAGCCTG CAGGCGCTGA AGCTCACCTT CGGCTTCGTC GACGGGCCGC TCTGGCAGCA GTATCTCACC TATCTCGGCA GCATCTTCAC CGGCGATCTC GGCCGCTCGA TCAAATATTT CCCGCTGCCG GTCACCTCGG TGCTCGGCCA TGCCCTTATC TGGACCGTCA GCCTGATGGG CACGGCGACG ATCATCAGCT TTGCGTTCGG CACCCTCCTC GGCATCGCCG CCGCCTGGCG CCGCGGAAGC AGGTTCGACG TTTTCGTTTC CGTCGGCGCG ATTTTTGCGA CATCGGTGCC GGCCGTCGTC ACCTCGCTGA TCGTGCTCTT CATCTTCGGC TTCACGCTCG GCTGGTTCCC GAACGGCTAT GCCGCCGACC CCTCGCTCGA TCCGGCTTTC AGCCTGCAAT ATCTCGGCAG CGTCGCCTAT CACGGCATCC TACCGATGGT CACACTCTGC ACCGTTTTGA TCGGCGGCTT CACCGTGACC ATGCGCAACA ACATGATCAA TCTGCTCGGT GAGGACTATA TCGTCATGGC CCGCGCCAAG GGGCTGTCCG ACCGGCATGT GATGCTCTGG TACGCGGCGC GCAACGCCCT GCTGCCGACC GTCTCCAGCC TTGCCATCGC CATCGGCACC ATTCTCGGCG GCTCGCTGGT GACCGAGGTC GTCTATAACT ATCCCGGTCT CGGCAATATT CTTTACCAGG CGATCCTCGC CCGCGATTAC CCCGTCATCC AGGGCCAGCT CCTCATCATG ACAGCGACCA TGCTGATCGC CAATTTCATC GTCGACGTCA GCTATATCCT GCTCGACCCG CGGCTGAAGG GAGCATGA
|
Protein sequence | MAFLLRRLVF YMAAFIAAAT INFFLPRLMP GDPVQIMFSS AGTELPPESL QALKLTFGFV DGPLWQQYLT YLGSIFTGDL GRSIKYFPLP VTSVLGHALI WTVSLMGTAT IISFAFGTLL GIAAAWRRGS RFDVFVSVGA IFATSVPAVV TSLIVLFIFG FTLGWFPNGY AADPSLDPAF SLQYLGSVAY HGILPMVTLC TVLIGGFTVT MRNNMINLLG EDYIVMARAK GLSDRHVMLW YAARNALLPT VSSLAIAIGT ILGGSLVTEV VYNYPGLGNI LYQAILARDY PVIQGQLLIM TATMLIANFI VDVSYILLDP RLKGA
|
| |