| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5741 |
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| Symbol | |
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| ID | 6977131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011366 |
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| Strand | - |
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| Start bp | 141363 |
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| End bp | 143687 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643393197 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002278015 |
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| Protein GI | 209546125 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.961978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACTG TGCTTTCATG TATCGCCGAC CAGCATGACT GGACGTTGCT TTTCGTCGCC
CTGTCGATCT GCTGCTTCGG CAGCCTGACG GCCGTCTTCA TGCTGACGCG TGCGCAGGAA
TGCGTGCAGC AGCATCACCA TTATTGGCTC ATCGCCGCTG CCGTCGTTCT CGGCGCCAGC
ACCTGGGCAA CCCATTTTAT CGCGATGCTG GCCTATGCCG GTCCGGTGCC GATCGGCTAC
GACGGTCCTC TGATCATTCT GTCGATTATC GCCGCCATCG TCCTGTTTGC AGGAGCGGTT
GAAATCGCCT TTATGAATGG CGGCCAGCTT GTCCAGGCGT CCGGCGGGGT CCTGTTTGGC
GTTGCCATTG CGGCAATGCA TTTCGTGGGG CTGCTCGCCA TCACGCCGTT CAGCATGGTT
TCGCTCGCCC TCGACAAATC GATCGTCGCC TGTGCGTTGG CAATCGGCTT CGGCATTGTT
GCGGTTGCGG CCCTGCGGCA TAGCGCAAGC AGGCGTTTTC ATATTTTCGC CGGCGCGGCG
TGCATCGTCC TGGCGATCTG CAGCCTCCAC ACCGTGTCGA TGAGCGGCGT CCAGATCACC
CCTTCCGCCG AGCCCGTGCA CGCCGATCTC TCCTCCGTCG ATCGGATCGC CATCGCCATC
GCCGTCTCGA TCATCTCCAC GTTGATCCTG CTCGGTGCCG CCGCAGCGCT GTTCCTCGAT
CGTCATTTGA CCGATCTACG CGGGTTGGCG AATGCCTCGT TCGAGGGGCT CGTCATCGCC
CAGGAGAATG TCGTCATCGA TCTCAACGAG AAATTCGCTG CGATGGCCGG CAAAGCAGCC
GCACTTCTGA AAGGCCAACC AGTCGAGGCG GTGCTTGCGA TCGAAAGACG CCTTGGCATC
GACACCTGCC AGGGAGCGGT ATTGTGCGAC GGCCAAGATA CGATTCCGGT CGAGATCCTT
GCTCGGACGA TCGAATATCG CGGGCGCGAG TGCCAGGTGA TCGCCGTGCG CGATCTGACG
GAGCGTCATG AGGCGAGCCG CAGGATCGAG CATATGGCAC GCCATGACTC ATTGACCGGC
CTGGCGAACC GCCGCGAGTT CGACCAGCGT TTCGAGATGG CGATGGCCCG CGCTGCCGAA
ACGCCAAGCG GCCTGGCGCT GCTTGCCCTC GATCTCGACC GTTTCAAACT CGTCAACGAC
ACATTCGGCC ACGCCGAGGG GGACGCGGTC CTGCAGCGTG TCGCCCAGGT CTTGCTCCGC
ACCTTGCCGG CCGATGTTAC GATCGCCCGC ATGGGAGGCG ACGAATTCTG CATCATCTTG
GAAAACGCGT CTCGCCAACA GACGGAAGCG TTGTCGGCCG ATCTGCAGCA CGCCTTCGCG
CAGGAATTCG CAGATCTCGC CACCTCTTCG GGATTCGGCG CCAGCATCGG CATTGCGTTG
TACCCGGAGC ACGGCGTTAC CGATCGGCGC CTGCGAAACA ACGCCGATAT GGCTCTCTAC
CGGGCCAAGA GCGGCGGCCG CGGCAGAGCC TGCACATTCG AGGCGGCGAT GGACATTGAA
CTGCATGCCA AGCGGCAGCT CGAGCACGAT CTGCGGCACG CAGTCGCCAA GGGAGAGCTG
TTCCTGGTCT ACCAGAGGAT CGTCGACACC TCCTCGCAAG AACCGTGCGG CTACGAGGCG
CTGTTGCGCT GGCGCCATGC AAGCAGAGGC GTCCTTGCAC CGGCGGACTT CATCGCCGCC
GCCGAAGAAA GCGGCTGCAT CATTCCCATC GGCATCTGGG TTCTCGAAGA AGCCTGCAGC
GAAGCAGCCT CGTGGAGGAC CCCGCTGACG ATCGCTGTCA ATATTTCGCC GGTTCAGTTC
CTGATGCCGA ACCTGGTGGA GCAGTTTTCG CACATTCTTG CGAAAACGGG GCTGCAGCCC
GACCGTCTAG AGCTTGAGAT CACCGAGACG GCGCTGTTTC ACGATCGGGC TGCCGTTCTT
TCCACGCTCG GTCAGCTGCG CGCGATGGGG ATCCGGGTGG TGCTCGACGA TTTCGGGACC
GGTTATTCCT CGCTCGCCAA CCTCCGGGAT TTTCCGTTCG ACAAGCTGAA GATCGATCGA
CGTTTCCTTG CCGGCATCGG CGCCGATCCA ACCATCAGGG CGCTGTTTGA GAATGTCATC
GAGATGGCGT CGACGCTCAA CCTGCCGGTG ATTGCCGAAG GAGTCGAGAC GCAGGAACAG
CTTGCGATCC TTCATGCAAG CCATCCGGCC CAGATGCAGG GCTTCCTGTT CGGCAAGCCT
GAGGCAGCGC CGAGCAGCCG GGCTCCGTTG AAAGCCATTG CCTGA
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| Protein sequence | MFTVLSCIAD QHDWTLLFVA LSICCFGSLT AVFMLTRAQE CVQQHHHYWL IAAAVVLGAS
TWATHFIAML AYAGPVPIGY DGPLIILSII AAIVLFAGAV EIAFMNGGQL VQASGGVLFG
VAIAAMHFVG LLAITPFSMV SLALDKSIVA CALAIGFGIV AVAALRHSAS RRFHIFAGAA
CIVLAICSLH TVSMSGVQIT PSAEPVHADL SSVDRIAIAI AVSIISTLIL LGAAAALFLD
RHLTDLRGLA NASFEGLVIA QENVVIDLNE KFAAMAGKAA ALLKGQPVEA VLAIERRLGI
DTCQGAVLCD GQDTIPVEIL ARTIEYRGRE CQVIAVRDLT ERHEASRRIE HMARHDSLTG
LANRREFDQR FEMAMARAAE TPSGLALLAL DLDRFKLVND TFGHAEGDAV LQRVAQVLLR
TLPADVTIAR MGGDEFCIIL ENASRQQTEA LSADLQHAFA QEFADLATSS GFGASIGIAL
YPEHGVTDRR LRNNADMALY RAKSGGRGRA CTFEAAMDIE LHAKRQLEHD LRHAVAKGEL
FLVYQRIVDT SSQEPCGYEA LLRWRHASRG VLAPADFIAA AEESGCIIPI GIWVLEEACS
EAASWRTPLT IAVNISPVQF LMPNLVEQFS HILAKTGLQP DRLELEITET ALFHDRAAVL
STLGQLRAMG IRVVLDDFGT GYSSLANLRD FPFDKLKIDR RFLAGIGADP TIRALFENVI
EMASTLNLPV IAEGVETQEQ LAILHASHPA QMQGFLFGKP EAAPSSRAPL KAIA
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