| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5697 |
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| Symbol | |
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| ID | 6977088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011366 |
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| Strand | + |
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| Start bp | 96244 |
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| End bp | 98001 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643393154 |
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| Product | ABC transporter related |
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| Protein accession | YP_002277972 |
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| Protein GI | 209546082 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.435877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGACA GACAAAAACT CCGGCTTGTC CTTCTTCTGG CGCTGGCGCT CGCAGCCCTC
CTGCTGATCG TCTTCGGACC GATGTTTCTC GGCCGTTTCA GCCTCAACGT CCTGACGCGC
TCGATGATCT ACGCCATGCT GGCGATCACC GTCGACCTGC TCTGGGGTTA TACGGGCGTT
CTCACCTTCG GGCAGGCTGC ATTCTTTGGC GTCGGCGCCT ATGCCACCGC CATGGTTCTC
ACCCATATCG GCGCAAGTCC GGCGCTTTTC GTCGTCGCCC TTGTCGCCGC CGTACTCGTT
CCGCTGGTGC TTGGCCTCGC CGTCGGCTGG CTGTCGTTCT ATCACGGATC GACACCGCTC
TATGCCACCG TGATCTCGCT CGTTGTGCCG ATCGTCGTCA CACAGCTGGT CTTTTCGGGC
GGCACCTGGA CCGGTTCCTC GAGCGGCCTT GTCGGTTACG ACACTCTGCC GCTCGGGCTT
CCCGGCTACT TCCGCCTGTC GGGCGCCTGC TTGCTGGCAT TGGCCATTGT TGCGATCGTC
TTTGTCCGGT CGGACGCCGG CCGTCTGCTT GTCGCAATCC GCGACAATGA AGCCCGCGTC
GCCTATCTGG GCATGAATCC GGCTCGGTTG AAGATCGTCC TGACGGGCGT TCTTGCCGGC
GTATGCGGCC TTGCGGGCTT CCTCTATGCC AATGCATCCG GTGTCGTCGC CCCAGAGAAT
ACCGGCTTCG TCTTCGGAAC CGAACTCGTG GTCTGGACGG CGCTTGGTGG CCGGGGAACG
ATCATCGGGC CCATGTTCGG CGCAATCGGC ATCGATTATC TGAGTGCCAG CCTGTCGGGC
GATCTGCCCT TCCTCTGGCA ACTGATCGTC GGTGCGCTCT TCGTCGTCAT GATCATCCTT
TTGCCGGGCG GCCTCGCCTC CCTGGTGACG CGTTTCCTCA AGACCGCAAA CTCCAACAGC
ACTCTCAAGT CCTTGCCGAC GCGCATCGTC GCCAGGAATG GTCCGGCGGC AGGCAAAAGC
CTTCTGTCGA TCCGCGGTCT CGGCAAGTCC TATGGCAGCC TCTCCGTCCT CAAGGGCATC
GACCTGGAAA TCGGCGCCGG AGAACTCGTC AGCCTGGTCG GCCCGAACGG CGCCGGCAAG
ACCACGCTGA TGCGTTGTCT GTCGGACGGC ACCGAGAAGG TCGAAGGTCA AGTAGATGTC
ATCGGCACCA ATATCGCCGG TCGTGCACCG GAACGGATCG TCGCCCTCGG CGTCGGCCGG
AAATTCCAGG TCGCCAGCAT CTTCGACAGC ATGACGATCG GCGAATGCCT GAAGATGGCA
CGGCTCAGCC GCGAAACACC CAACCCAGTC CGATCATCCG CCGAGATCAT GCTGCCGCCA
GCTGCAGCCG AGATCCTGAC GCTCACCGGC ATGGCTGAGA TGCTGGACAA ACCGGTCGTG
CTGCTGTCGC ACGGTCAAAG GCAGGCTCTC GAACTGGCAA TGGTCGTCGC TCTGGAACCA
CGCATCATCC TGCTCGACGA ACCGACGGCG GGTCTTACCA AGATCGAGCG CATGACCATC
GGCACTATCC TCAAGAAACT GACGGACGAG ATGGGTTTTG CCGCCATCCT GGTCGAACAC
GATCTGGATT TCGTGCGTGA GATATCGAGC CGCATCGTGG TTCTCCACCA GGGTAAGCTG
GTTCTCGACG GCACGGTGAA TGACGTGGTC AATTCCGAAA CGGTTCGCAC CATCTACGCA
GGAGGCGCAC ATGGCTGA
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| Protein sequence | MRDRQKLRLV LLLALALAAL LLIVFGPMFL GRFSLNVLTR SMIYAMLAIT VDLLWGYTGV
LTFGQAAFFG VGAYATAMVL THIGASPALF VVALVAAVLV PLVLGLAVGW LSFYHGSTPL
YATVISLVVP IVVTQLVFSG GTWTGSSSGL VGYDTLPLGL PGYFRLSGAC LLALAIVAIV
FVRSDAGRLL VAIRDNEARV AYLGMNPARL KIVLTGVLAG VCGLAGFLYA NASGVVAPEN
TGFVFGTELV VWTALGGRGT IIGPMFGAIG IDYLSASLSG DLPFLWQLIV GALFVVMIIL
LPGGLASLVT RFLKTANSNS TLKSLPTRIV ARNGPAAGKS LLSIRGLGKS YGSLSVLKGI
DLEIGAGELV SLVGPNGAGK TTLMRCLSDG TEKVEGQVDV IGTNIAGRAP ERIVALGVGR
KFQVASIFDS MTIGECLKMA RLSRETPNPV RSSAEIMLPP AAAEILTLTG MAEMLDKPVV
LLSHGQRQAL ELAMVVALEP RIILLDEPTA GLTKIERMTI GTILKKLTDE MGFAAILVEH
DLDFVREISS RIVVLHQGKL VLDGTVNDVV NSETVRTIYA GGAHG
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