| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5630 |
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| Symbol | |
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| ID | 6977021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011366 |
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| Strand | + |
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| Start bp | 16123 |
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| End bp | 17265 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643393087 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002277905 |
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| Protein GI | 209546015 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00466879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCCG TTTCCGACGA CGCCGCCGAA CAGGCGACCT TTCAGGTCCT GACCCGGGCG
CTGGACAAGC TCTTGGGCCC GATCCGCTTT CTCCTCGAGG ATCCGAGCGT GTCGGAAATC
CTGATCAACG GAACATCCGA CATCTTCGTC GAAAGGCGCG GCAAGCTCGA GCGCGCCGAT
ACGCGTTTTG CCAGCCGTGA GGACCTGGAA TCGGCCGCGC GCAGCATCGC GCAGTTCTCC
GGCAAACGGC TGACGCCGGA GGAGCCGAGC GTCGAGGCCC GCCTGCCGGA TGGTTCGCGC
GTGCAGATGA TCCAGCCGCC CGCCGCCCGC ACCGGGCTCT GCATCTCCAT CCGCCGCTTT
CTGAAAGAAC ATCGCAGCAT CCGCGATCTC GTCACCCAGG GCAGCCTGAC CGAAGCGTCG
CTGTCGCTAC TGCAGGCGGC CGTCGGGCTA CAGAAGAACG TCATCATTTC AGGCGGCACC
GGCACCGGCA AGACGACGAT GCTGAACGCG CTGTCGGAAG CCTTTGCCGA TCACGAGCGC
ATCATCGTCA TCGAGGACAC CTCGGAACTG CAGATCCGCA AGGAGCACGT CGTCTATCTC
GAAGTGACCA AGCCCGACCG CTTCGGCCGG GGCGGCGCCA GCATCCGCGA CCTGTTCCGC
TCGTCGCTGC GCATGCGGCC AGACCGCATC ATCGTCGGCG AATGCCGCGG CGGCGAGGCG
CTCGATATGA TCCAGGCGAT GACCTCGGGC CATAGCGGCA GCCTTTCGAC GGTGCATGCC
AACACACCCT ACGATGCCCT TCATCGGCTG GAAACGCTGG CGCTGATGTC GGATATCGAC
ATGCCGCTCC GGCCGCTGCG CGCACAGATC GCCTCGGCAG TCGACGTCGT CGTGCAGATC
GCCCGCTTCA AGCGCACCGG ACGACGCCGG GTGATCGAGA TTTCCGAGAT CAAGGGCCTC
AACGAGGACG GCCAATATAT CGTCGAGAGC ATCTATAAGC TCGAAGGCGA CGGTCATTCC
AATTCCGATG GCGCATTGCT CTGGACCGGG GTCGTGCCGA GTTTCGCCGC CGATGCGGTG
GAAGAACTGC AAGGCGCAGA GCGCGCGGAA TGGATGGAGC CCGCCGCGCG GGAAACGGCT
TGA
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| Protein sequence | MKAVSDDAAE QATFQVLTRA LDKLLGPIRF LLEDPSVSEI LINGTSDIFV ERRGKLERAD
TRFASREDLE SAARSIAQFS GKRLTPEEPS VEARLPDGSR VQMIQPPAAR TGLCISIRRF
LKEHRSIRDL VTQGSLTEAS LSLLQAAVGL QKNVIISGGT GTGKTTMLNA LSEAFADHER
IIVIEDTSEL QIRKEHVVYL EVTKPDRFGR GGASIRDLFR SSLRMRPDRI IVGECRGGEA
LDMIQAMTSG HSGSLSTVHA NTPYDALHRL ETLALMSDID MPLRPLRAQI ASAVDVVVQI
ARFKRTGRRR VIEISEIKGL NEDGQYIVES IYKLEGDGHS NSDGALLWTG VVPSFAADAV
EELQGAERAE WMEPAARETA
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