Gene Rleg2_5620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5620 
Symbol 
ID6977011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp6921 
End bp7784 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content63% 
IMG OID643393077 
Producttype II secretion system protein 
Protein accessionYP_002277895 
Protein GI209546005 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4965] Flp pilus assembly protein TadB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA GCATTCTGCA GATTTTTACG GTCGCCCTCG GCGCGGTGAC GGCGGGGCTG 
CTCGTGTGGG GTGCGCCGGT GCGCTGGCCG GCGCCGCTGC TGCGCGCCAC CGAACGCGAT
ATTGCGCTCG CCAGCGAAGC GGCACAGGTG TTCGGCCGCG ATGCCGTGCC GCCCTATACG
ATGATCCTTG CCTACGGCAT CACGGCAATC GTCGTCTTCC TGGTGGTCTC GCTGATCTTC
GGGCCGATCT TCGGCATCGT CATCGCCATT CCGGTCGCTT TCTTCCTGCC CAAGGCGGTC
ATCCGCTATT TCCTGCAGCG GCGCTGGCTG CAGATCGAAT CGCAGCTTCC CTATGCCGTC
GACCAGATCG TCTCGGCGGT GCGCACCGGC AAGCCGCTCG CGGTCGCCGT CAATGCGGTG
GCCGATACCG GCCAGATGCC GGCCTCGCGC GAATTCGAGC GCATCGCCCG CGAACAGAAG
CTCGGCATCG GCCTGGTCGA GGCGCTCGAC CGCCACGGCC GCACCGTGCC GAGCCTGCAT
TTCAAGATGG TCGATGCGGC CCTTGGTCTC TTTGCCCGCC AGGGCGGCGA TATTTCCGAG
CCGCTGACGG AAATGTCGAA ATCCTTCAAG GAAATCTGGA AGCTCGACCA GAAGATCACC
ACCTCGTCGT CGCAGGCGCG CATGAACTTT CGCGTCGTCA ACGGCGGCGC GCTGTTCATG
ATCCTAATGA TCTTCTTCGG CCAGCCCGAG CTGATCGACA AGGTGTTCGG CAACGCCATC
GGCATCGTCA TCGCGATCGT CGGCGCCATT CTCTATGCCA CCGGTTTCTT CTGGATGCGC
TCGATGATGA AGGTGTCGGT CTGA
 
Protein sequence
MDISILQIFT VALGAVTAGL LVWGAPVRWP APLLRATERD IALASEAAQV FGRDAVPPYT 
MILAYGITAI VVFLVVSLIF GPIFGIVIAI PVAFFLPKAV IRYFLQRRWL QIESQLPYAV
DQIVSAVRTG KPLAVAVNAV ADTGQMPASR EFERIAREQK LGIGLVEALD RHGRTVPSLH
FKMVDAALGL FARQGGDISE PLTEMSKSFK EIWKLDQKIT TSSSQARMNF RVVNGGALFM
ILMIFFGQPE LIDKVFGNAI GIVIAIVGAI LYATGFFWMR SMMKVSV