Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3550 |
Symbol | |
ID | 6977003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3885807 |
End bp | 3886667 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643393070 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_002277888 |
Protein GI | 209545659 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGAAC TCCCTGAAGT CGAAACAGTG ATGCGCGGGA TGCGATTGCA TCTCGACGGG AAGACGATCG CGCGGGTCGC GGTGCGTCGC GCCGACCTGC GTTTCCCCTT TCCCGCGGAC CTGGTGGCCC GGCTGGAGGG CGCCACGATC ACCGGTTTCG CCCGACGGGC GAAATATATC CTGATCCGGC TGGATACGGG CGATACCCTG CTGCTGCACC TGGGCATGTC GGGGCGGGTC CTGCTGTCAT TGCCCGGCGA CGCCCCCGTG CCCGACCGGC ACGAGCATTT CTTCTTCGAG ACCACGGACG GGACGCGGTG CGGCCTGATC GACCCCAGGC GCTTCGGCGC GGTCGACCTG ATGCCGACGG CGGAGGAGCG AGCACATCGG CTGCTGGCCC GACTCGGTCC CGAACCGCTG GGCAACCAGT TCTCGCAACA CTGGCTGCAG GAAGTACTGG CCCGGCGGCG GACCTCCATC AAGGCGGCGC TGCTGGACCA GACGGTGGTG GCGGGCCTGG GCAATATCTA TGTGTCCGAG GCGCTGTTCC GCGCCGGCAT CCATCCGGCA CGCCTGGCCT GCACCCTGGA CGCGGCCGAG GACGCGCGCC TGGTCCAGGC GATCCGCGCC GTGCTGCGCG AAGCGATCGC AGCGGGCGGG TCCAGCCTGC GCGACTATGT CCAGCCGGAT GGGGAACTGG GTTATTTCCA GCACGCGTGG CGTGTCTACG GCCGTGCGGG GCAGGGATGC CCGGATTGTC CCGGTCCCCC CGCATGCCAT GGTGTGGAGC GGCTGGAACA GGCCGGACGC TCCAGCTTCT TCTGCCCCCT GTGCCAGCCC CCGCCGGGCA AGGTCTCGTG A
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Protein sequence | MPELPEVETV MRGMRLHLDG KTIARVAVRR ADLRFPFPAD LVARLEGATI TGFARRAKYI LIRLDTGDTL LLHLGMSGRV LLSLPGDAPV PDRHEHFFFE TTDGTRCGLI DPRRFGAVDL MPTAEERAHR LLARLGPEPL GNQFSQHWLQ EVLARRRTSI KAALLDQTVV AGLGNIYVSE ALFRAGIHPA RLACTLDAAE DARLVQAIRA VLREAIAAGG SSLRDYVQPD GELGYFQHAW RVYGRAGQGC PDCPGPPACH GVERLEQAGR SSFFCPLCQP PPGKVS
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