| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3546 |
|---|
| Symbol | |
|---|
| ID | 6976999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 3881481 |
|---|
| End bp | 3883208 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643393066 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002277884 |
|---|
| Protein GI | 209545655 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGA GTTCGCTGCC CGCCCCTTCG TCCCGCCCGG CCCGGCCCAA TGTGTTCGAT
CTGGCTGCCC TGCTGTGCAT CATGGGGCTG GCGGTCGTGC TGGGCACGGC GGGGCGGCAC
ATGCTGGCCC CGATATCGGC CCCCAACGCC GCCACCATCC ACCTCGATCC CGCCTGGCTG
CCGGGCTATG CGGTGCGCAC CACCCTGCGG ATGTTCGCGG CCCTGGGCGC GTCGCTGTTC
TTCACCTTCA CCTATGCGGT CTGGGCGGCC AAGAGCCCCC GGGCGGGGCT GGTGCTGGTG
CCGGTGCTGG ACGTGCTGCA ATCCGTGCCG ATCCTGGGGT TCCTGACCTT TACCGTCGTG
TTCTTCATGG GCCTGTTCCC CGGGCGCATC CTGGGGGCGG AACTGGCCGC GATCTTCACC
ATCTTCACCA GCCAGGCCTG GAACATGGCC TTCAGCATGT ACCAGTCCCT GCGGGCCGTC
CCCCCCGACC TGGACGAGGT CGCGCGGTGT TTCGGCCTGA CGGGATGGCA GAAATTCTGG
CGGCTGGAGG TCCCGTTCGC CGTGCCGGGC CTGGTGTGGA ACGCCATGAT CTCGATGTCC
GGCGGATGGT TCATGGTGGT GTATTCCGAG ACGATCACGG TCGGGAACAC CAATGTCCTG
CTGCCCGGAA TCGGGTCGTA TGTCGGCACC GCCATCGCCC AGCGCGACCT GTGGGCGGTT
CTGTATGCCA TCGTGGCGAT GATGGTGGTG ATCCTGGCCT ATGACCAGCT CGTCTTCCGG
CCGCTGGTCG CGTGGTCGGG GCGCTTCGCC GCCACCGGCA TCGAGGGCGC GTCCGCGTCC
GACCCCTGGC TGCTGGTGCT GCTGCGCCGC ACCGCCCTGC TGCGCCGGAT CACGGACGCG
ATCGGCGACG GGCTGACGGC GATCGGCGGC CTGAAGCTGG GCCGCCGCCC GTCCGATGCG
CGCCGCACCC CGCTGGTCCC CGACCGCATC CGCGACGTGG TCTGGGCGGT CGGGCTGGCC
ATGCTGTCCG GCGGGGCCGC GTGGCAGGTC TGGCTCTATG CGCGCGCGAC CATCTCCATG
GCGGAATTCC TCCATGTCGT GTCGCTGGGC GGCCTGACGC TGGCGCGGGT GGTGGCGATG
GTTCTGCTGG CCTCGCTGAT CTGGGTGCCG GCGGGGGTCT GGCTGGGGCT GGACCCGGTG
CGGGCGCGGC GGGCCCAGTT CATCGCCCAA TTCATGGCCG CCTTTCCGGC CAACCTGTTC
TTCCCGATCT TCGTCCTGTT CATCGTCCAT TTTCATCTGA GCAGCGATAT CTGGCTGACG
CCGCTGATGA TCCTGGGCAC CCAGTGGTAT ATCCTGTTCA ACGTCGTGGC CGGGGCCGCG
TCCTATCCCG CCGACCTGCT GGAGGTCGCG CGCAGCCTGC AGGTCGGCGG ACGGCTATGG
TGGCTGCGGG TCATCCTGCC CGGGATCGTG CCGTTCTACA TCACCGGCGC CATCACGGCG
TCGGGCGGGG CATGGAATGC GGCGATCGCG GCCGAGGTCG CAAGCTGGGG CGACGATCAC
CTGTCCGCCC ACGGCCTGGG CGCCTACATC GCCCACGCCA CCGTTGCCGG CGACACCGCG
CATGTCGGGC TGGGCATGAC GGTCATGGCG GCGTTCGTCC TGCTGTTCAA CCGTGCCGTC
TGGCGCCCGC TTGCCGAATA TGCCCGCCGC CACTTCACCC TGAGCTGA
|
|---|
| Protein sequence | MTASSLPAPS SRPARPNVFD LAALLCIMGL AVVLGTAGRH MLAPISAPNA ATIHLDPAWL
PGYAVRTTLR MFAALGASLF FTFTYAVWAA KSPRAGLVLV PVLDVLQSVP ILGFLTFTVV
FFMGLFPGRI LGAELAAIFT IFTSQAWNMA FSMYQSLRAV PPDLDEVARC FGLTGWQKFW
RLEVPFAVPG LVWNAMISMS GGWFMVVYSE TITVGNTNVL LPGIGSYVGT AIAQRDLWAV
LYAIVAMMVV ILAYDQLVFR PLVAWSGRFA ATGIEGASAS DPWLLVLLRR TALLRRITDA
IGDGLTAIGG LKLGRRPSDA RRTPLVPDRI RDVVWAVGLA MLSGGAAWQV WLYARATISM
AEFLHVVSLG GLTLARVVAM VLLASLIWVP AGVWLGLDPV RARRAQFIAQ FMAAFPANLF
FPIFVLFIVH FHLSSDIWLT PLMILGTQWY ILFNVVAGAA SYPADLLEVA RSLQVGGRLW
WLRVILPGIV PFYITGAITA SGGAWNAAIA AEVASWGDDH LSAHGLGAYI AHATVAGDTA
HVGLGMTVMA AFVLLFNRAV WRPLAEYARR HFTLS
|
|---|
| |