Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3522 |
Symbol | |
ID | 6976974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3853627 |
End bp | 3854148 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643393041 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002277860 |
Protein GI | 209545631 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.971097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTCTTT TACCTGATTT GCGGGGGTTT GCGCGCTTCC TGACGCGGGA TACGGCGGCC TCTGACGATC TTGTGCAGGA GACGGTGGTC CGTGCGCTGG GGGCGCTGGA GCAGTTCCGG GCGGACACCA ACCTGAAGGC GTGGCTGTTC ACCATCCAGC GCAACATCTT TTACGAGCAG AGGCGCCGCA ACCAGCGTGA ACGGCTGGTC ATGAGCGATT ATGCCGCCGA GCCGCGACAC GGCACCCAGG GGCGGCCGGC CAGTTCGGGC GACGACGTGC GCGATCTGGA AAGCGTGTTC TGGCTGCTGA CCCCCCTGCT GCGCGAGGCG CTGATCCTGG TGGGCGCGCA GGAGATGACG CACGAGGAAG CGGCCAGGAT CTGCGGCGTG CCGGTGGGCA CGATGAAGGC ACGCGTGTCG CGGGCCCGGG CCCGGCTGGC CATCCTGGTC GCCCGGCCCC ACGAAGACTG CGGTCTGGAC GCCGACCTGG AATGCGATCC TGCGGCCGAC GAGGCCCCGT GA
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Protein sequence | MCLLPDLRGF ARFLTRDTAA SDDLVQETVV RALGALEQFR ADTNLKAWLF TIQRNIFYEQ RRRNQRERLV MSDYAAEPRH GTQGRPASSG DDVRDLESVF WLLTPLLREA LILVGAQEMT HEEAARICGV PVGTMKARVS RARARLAILV ARPHEDCGLD ADLECDPAAD EAP
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