Gene Gdia_3522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3522 
Symbol 
ID6976974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3853627 
End bp3854148 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content68% 
IMG OID643393041 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002277860 
Protein GI209545631 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.971097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTTT TACCTGATTT GCGGGGGTTT GCGCGCTTCC TGACGCGGGA TACGGCGGCC 
TCTGACGATC TTGTGCAGGA GACGGTGGTC CGTGCGCTGG GGGCGCTGGA GCAGTTCCGG
GCGGACACCA ACCTGAAGGC GTGGCTGTTC ACCATCCAGC GCAACATCTT TTACGAGCAG
AGGCGCCGCA ACCAGCGTGA ACGGCTGGTC ATGAGCGATT ATGCCGCCGA GCCGCGACAC
GGCACCCAGG GGCGGCCGGC CAGTTCGGGC GACGACGTGC GCGATCTGGA AAGCGTGTTC
TGGCTGCTGA CCCCCCTGCT GCGCGAGGCG CTGATCCTGG TGGGCGCGCA GGAGATGACG
CACGAGGAAG CGGCCAGGAT CTGCGGCGTG CCGGTGGGCA CGATGAAGGC ACGCGTGTCG
CGGGCCCGGG CCCGGCTGGC CATCCTGGTC GCCCGGCCCC ACGAAGACTG CGGTCTGGAC
GCCGACCTGG AATGCGATCC TGCGGCCGAC GAGGCCCCGT GA
 
Protein sequence
MCLLPDLRGF ARFLTRDTAA SDDLVQETVV RALGALEQFR ADTNLKAWLF TIQRNIFYEQ 
RRRNQRERLV MSDYAAEPRH GTQGRPASSG DDVRDLESVF WLLTPLLREA LILVGAQEMT
HEEAARICGV PVGTMKARVS RARARLAILV ARPHEDCGLD ADLECDPAAD EAP