| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3487 |
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| Symbol | |
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| ID | 6976939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3817617 |
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| End bp | 3819038 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643393008 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_002277827 |
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| Protein GI | 209545598 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0401415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATTT CTAGACGGGT TCTGCCCATG GCGGCGTTCG CGGGCATGTC GCTATGCCTG
GCGGGTGCGG ATGCCCGATC GACTCACCCG GCCGCATCCG GATCGGTGGC GCACGGTGCC
CACGCGGTGC TGGGAATCGA GGAAGGCGCC GGCAAGCTGG TGAAGCTGGA TGGCATCGCG
ACGAACATCT TCGTGGCGGA CCCCAAGGTG GTCGAGGTCC GGGCCGCCAG TCCGGACAGC
ATGTTCGTGT TCGGGGTCGG GGCCGGGCAG ACGACGGTGA TCGCCACCAG CCGGTCCGGC
GGCGTGGTGG CACGCTATAC GGTGGTCGTC CTGCCCTCGA GCTATCGCGC GTCGGCCCTT
CGCCGGGATG TGGGGCAGCA GAATCCTCGT GTCCGCATCG GAACGGGGGC GGACGGCAGC
ATCGGCATCG AGGGGACTGA AACCTCCTCG GAATCGGCCG AGCAGGCGCT GGAGGGGGCG
ACGGCGCTGG TCGGAAAGGG GGGGCGTGTC GGCGATTATG CGTCCGTGCC CGGTTCGATC
CAGGTCAATT TGAAGGTCCG GATCGTTGAA ATGTCCCGCA GTCTGGTACG CGAACTGGGC
GTGGAATGGC AGTCGGTCAA TGCGCTGGGG ACGGCGGCGG CGATCGGGAT ATCGACCAGC
AACCCGTTGG CGGCCCTGAC GACGGAACAG AGTGCCTTCA ACTTTCTGTC CCGCTTTTCG
GCGGCGGGGC GTCCCGTGAC CGTGGAAACC GTCATCGATG CCCTGTCCCA GGACGGGCTG
ATCCACAGCC TCGCGGAGCC CAACCTGACC ACCGTCAGCG GTCAGGCCGC GAGCTTCATC
GTGGGTGGCG AATATCCGAT TCCGGTTTCC AGCTATAACA ACAACATCAA CGTGCAGTAC
AAGCAGTATG GCATTTCGCT GGCCTTCGTG CCGACCGTGC TGGCTGATGG ACGGATCAGC
CTGCATGTGC GGCCGGAAGT CAGCGCGCTT TCGACCCAGG GGGCAGTGAC ATTGTCCGAG
GCGAACGGCA ACCTGCAGAT TCCGGCCCTG ACGGTCCGGC GCGCGGATAC GACGGTCGAA
CTGGGGAGCG GCCAGAGTTT TGCCATTGCC GGGCTTATGC AGGATTCGAC CAACATGCAG
GGGTTGGGCC TGCCGTTCCT GGGCGATATT CCGGTTCTGG GGGCCCTGTT CAAATCCAGC
AGTTTCCAGA AGAACGAAAG CGAACTGGTC ATTGTCGTCA CGCCTTATCT CGTCCGGCCG
GTGGATAATG AATCGATGCT GCATAGCCCG GACGACAACT GGGCTCCGCC GGGCGATCTG
GATCGTATTT TCCTGATGCG ACAGAATATT TATAAATATG CCGGCAAGAA AAATGTGGCG
CGTCGCGACG TGAACAGCGA CGCTGGATTC ATGGTGGAGT GA
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| Protein sequence | MFISRRVLPM AAFAGMSLCL AGADARSTHP AASGSVAHGA HAVLGIEEGA GKLVKLDGIA
TNIFVADPKV VEVRAASPDS MFVFGVGAGQ TTVIATSRSG GVVARYTVVV LPSSYRASAL
RRDVGQQNPR VRIGTGADGS IGIEGTETSS ESAEQALEGA TALVGKGGRV GDYASVPGSI
QVNLKVRIVE MSRSLVRELG VEWQSVNALG TAAAIGISTS NPLAALTTEQ SAFNFLSRFS
AAGRPVTVET VIDALSQDGL IHSLAEPNLT TVSGQAASFI VGGEYPIPVS SYNNNINVQY
KQYGISLAFV PTVLADGRIS LHVRPEVSAL STQGAVTLSE ANGNLQIPAL TVRRADTTVE
LGSGQSFAIA GLMQDSTNMQ GLGLPFLGDI PVLGALFKSS SFQKNESELV IVVTPYLVRP
VDNESMLHSP DDNWAPPGDL DRIFLMRQNI YKYAGKKNVA RRDVNSDAGF MVE
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