| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3486 |
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| Symbol | |
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| ID | 6976938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3816752 |
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| End bp | 3817630 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643393007 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_002277826 |
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| Protein GI | 209545597 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0314928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGGC GTATCCTGCT GATAGTCGTT GCCGTGTCCG GTCTGATCGG CGTGGTGATC
CTGGGACGGC TGGCGCTCCA TTCGGGTGAG AAGCCCGTGG TCGCGCAGGT CACGGAAAAG
AAGGTGCCGA CCGTCGGCGT CCTGGTTGCG CGGAAGGCGG AGCCGGCCGG TGCCTTGTTG
CAGTCCGGGG ATCTTCAGAC GAAAGATTTT CCCGCCAACC TGGTGCCCCC CGGTGCGATT
CACGACGTGC CGTCCGAACG CGCGGCGTTG ACGGGCGGGT TGCTGCGCGT GCCGGTTCCC
GAGGGCGGCC TGCTGACGAA TGAAGCCGTG CTGCGCGTCG GCGATCACGG GTTTCTGGCA
GCCGTATTGA AGCCCGGGGA TTCAGCCGTC AGCGTCGGTG TCGACTCCGT TTCGGGGGTG
GCCGACCTGA TCGAGCCTGG GGATTATGTC GATCTGATCG TGACCCATGA TGTGGCGACG
GCCGACGTCG CCAATTCGGG GGGTGGGGCA GGCGGCAATC CGGGCGGGGA CGCGGGTGGC
GGTCGTATTG CTGCCGAAAC GGTCCTGTCC GCCTTGCGTG TCGTGGCCAT CGATCGTGAA
ATGCAGCATA CGAGCACTGT CGACAGCCGG GGAGTGGGTA ACCGGACGGT CACGCTGGAG
GTGACACCGG CCCAGGCTGA GGCTGTCGCC GTGGCGGGGC GGCTGGGGCG CCTGACCCTG
GCGGTCAGGT CGCTCGATCA GGCCGGGGTC GCGGCTTTTG CCCCGCATAC GACATGGGGT
GGCGATGTTT CGCCCGCGCT GGCGCATGGC CCGGAATCCG ACGCGGAGAC GGTGCACCTT
TATAATGGGA CCGCGGATCT AAAAGATGTT CATTTCTAG
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| Protein sequence | MIGRILLIVV AVSGLIGVVI LGRLALHSGE KPVVAQVTEK KVPTVGVLVA RKAEPAGALL
QSGDLQTKDF PANLVPPGAI HDVPSERAAL TGGLLRVPVP EGGLLTNEAV LRVGDHGFLA
AVLKPGDSAV SVGVDSVSGV ADLIEPGDYV DLIVTHDVAT ADVANSGGGA GGNPGGDAGG
GRIAAETVLS ALRVVAIDRE MQHTSTVDSR GVGNRTVTLE VTPAQAEAVA VAGRLGRLTL
AVRSLDQAGV AAFAPHTTWG GDVSPALAHG PESDAETVHL YNGTADLKDV HF
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