Gene Gdia_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3456 
Symbol 
ID6976908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3789892 
End bp3790668 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content62% 
IMG OID643392977 
Productflagellar hook capping protein 
Protein accessionYP_002277796 
Protein GI209545567 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.290459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.317181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA CATCGAGCAT CAGCAGCGAG TATCAGCTTG TCCAGGCGGC GGAATCGTCC 
GCCAAGACGT CGGCGAGCAG CTATGCGAGC AGCAGCGCCG CCACCGGAAC GGGCAGCAGT
TCCGTATCGA GCCTCGCGTC GCTCGCGGAT AATTACAACA CCTTCCTGAC CCTGCTGACG
ACGCAGTTGC AGAACCAGGA CCCAAGCAGC CCGATGAGTT CCGACACCTT TACGCAGGAA
CTCGCGCAGT TCGCCGGGGT GGAGCAGCAG GTCCAGACCA ATACCAATCT TTCGACCCTG
ATTTCGCTGA ACGAGGAAAG CCAGCTTAAT TCCGATGCCA GCCTGGTCGG CAAGACGGCG
ACCGCGGATT CGACGACGCT GCCCCTGCAG AATGGTTCCG CTTCCCTCAG TTTCACGGGA
ACCGCCGGCG AGACGGTTGC GATCGCTGTG GCCAATTCCT CCGGCACGGT CGTGAAGGAC
GTCGTCGCCA CCGCCGACAG CGGTACCAAC ACGTGGACGT GGGACGGAAC GGACAATAGC
GGCAACCAGT TGACGGACGG TGCCTACAGC GTCGCGGTGG AGACGATCAA TTCCTCCGGT
ACGACCTCTG CCGTGCCGTT CACGGTCAGC GGCACCATCA CGGGCGTGAC GAAGGGAAGC
ACCGATATGG AAGCCGAAAT GGGAAGCGCG GATATTCCGA TGGCGGACAT CACGGCGACC
TCGTCCTCCA CATCGTCAAC GTCGACGTCG TCCAGTGGAA GCAGCACCGG CTCCTGA
 
Protein sequence
MTTTSSISSE YQLVQAAESS AKTSASSYAS SSAATGTGSS SVSSLASLAD NYNTFLTLLT 
TQLQNQDPSS PMSSDTFTQE LAQFAGVEQQ VQTNTNLSTL ISLNEESQLN SDASLVGKTA
TADSTTLPLQ NGSASLSFTG TAGETVAIAV ANSSGTVVKD VVATADSGTN TWTWDGTDNS
GNQLTDGAYS VAVETINSSG TTSAVPFTVS GTITGVTKGS TDMEAEMGSA DIPMADITAT
SSSTSSTSTS SSGSSTGS