Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3456 |
Symbol | |
ID | 6976908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3789892 |
End bp | 3790668 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643392977 |
Product | flagellar hook capping protein |
Protein accession | YP_002277796 |
Protein GI | 209545567 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.290459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.317181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGA CATCGAGCAT CAGCAGCGAG TATCAGCTTG TCCAGGCGGC GGAATCGTCC GCCAAGACGT CGGCGAGCAG CTATGCGAGC AGCAGCGCCG CCACCGGAAC GGGCAGCAGT TCCGTATCGA GCCTCGCGTC GCTCGCGGAT AATTACAACA CCTTCCTGAC CCTGCTGACG ACGCAGTTGC AGAACCAGGA CCCAAGCAGC CCGATGAGTT CCGACACCTT TACGCAGGAA CTCGCGCAGT TCGCCGGGGT GGAGCAGCAG GTCCAGACCA ATACCAATCT TTCGACCCTG ATTTCGCTGA ACGAGGAAAG CCAGCTTAAT TCCGATGCCA GCCTGGTCGG CAAGACGGCG ACCGCGGATT CGACGACGCT GCCCCTGCAG AATGGTTCCG CTTCCCTCAG TTTCACGGGA ACCGCCGGCG AGACGGTTGC GATCGCTGTG GCCAATTCCT CCGGCACGGT CGTGAAGGAC GTCGTCGCCA CCGCCGACAG CGGTACCAAC ACGTGGACGT GGGACGGAAC GGACAATAGC GGCAACCAGT TGACGGACGG TGCCTACAGC GTCGCGGTGG AGACGATCAA TTCCTCCGGT ACGACCTCTG CCGTGCCGTT CACGGTCAGC GGCACCATCA CGGGCGTGAC GAAGGGAAGC ACCGATATGG AAGCCGAAAT GGGAAGCGCG GATATTCCGA TGGCGGACAT CACGGCGACC TCGTCCTCCA CATCGTCAAC GTCGACGTCG TCCAGTGGAA GCAGCACCGG CTCCTGA
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Protein sequence | MTTTSSISSE YQLVQAAESS AKTSASSYAS SSAATGTGSS SVSSLASLAD NYNTFLTLLT TQLQNQDPSS PMSSDTFTQE LAQFAGVEQQ VQTNTNLSTL ISLNEESQLN SDASLVGKTA TADSTTLPLQ NGSASLSFTG TAGETVAIAV ANSSGTVVKD VVATADSGTN TWTWDGTDNS GNQLTDGAYS VAVETINSSG TTSAVPFTVS GTITGVTKGS TDMEAEMGSA DIPMADITAT SSSTSSTSTS SSGSSTGS
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