Gene Gdia_3386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3386 
Symbol 
ID6976832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3709537 
End bp3710217 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content66% 
IMG OID643392902 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_002277727 
Protein GI209545498 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.328589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAG CGATCCTGTT CGATACGGAA ACGACCGGGC TGGACCCCGC GCGGGGCGAC 
CGGGTGATCG AAATCGCGGC CCTGGAACTG GTGGGCGACC TGCCGACCGG GCGGCACTTC
CATGTGCTGA TCCACCCTGA CCGCGACATT CCCGAAGAGG CATCGCGGGT TCACGGCTTC
ACGCTGGCGG ACCTGGAGGG CAAGCCCCGC TTTCACGAAA TCGCCGACGA TTTCCTGGCC
TTCATCGGGC AGGACGACCT GATTGCCCAT AATGCGCGAT TCGATTTCGG CTTCCTGAAT
GCGGAACTGA AGCGCGCCGA GCGGCCGGCT TTGTCGCTGG ACCGGATGGT CGATACGCTG
GACATCGCGC GCGACCGCTA TCCCGGCCTG CCCAACAGCC TGGATGCGCT GTGCCGCCGC
TTTTCCATCG ACCTGTCGGC CCGCACCACC CACAACGCAC TGCTGGACTG CCGGCTGCTG
GCGGAAGTCT ATCTGGAACT GATGGGCGGC CGGCAGCGCG GACTGGGCCT GACGGTGCAG
GATGGCGGGG GGGCGCAGGT CTCCTATGCC TATGACCTCG CCGGCGCGCG CACCCCGCGC
CTTATCGTCC CGACCGAGCA GGAACTGGCG GCGCACGGCC GTTTTCTGGA CAAGATCAAG
GAGCCGATCT GGTCGGCCTG A
 
Protein sequence
MKRAILFDTE TTGLDPARGD RVIEIAALEL VGDLPTGRHF HVLIHPDRDI PEEASRVHGF 
TLADLEGKPR FHEIADDFLA FIGQDDLIAH NARFDFGFLN AELKRAERPA LSLDRMVDTL
DIARDRYPGL PNSLDALCRR FSIDLSARTT HNALLDCRLL AEVYLELMGG RQRGLGLTVQ
DGGGAQVSYA YDLAGARTPR LIVPTEQELA AHGRFLDKIK EPIWSA