Gene Gdia_3384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3384 
Symbol 
ID6976830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3708046 
End bp3708924 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content71% 
IMG OID643392900 
Productshikimate 5-dehydrogenase 
Protein accessionYP_002277725 
Protein GI209545496 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.442523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA CCGCCCCCAT GCGACGGGCG ATCGGCGGCG GGACGATGCT GGCCGGAGTG 
ATCGGCTGGC CGGTATCGCA TTCGCGCTCG CCGCTGCTGC ATAATTTCTG GCTGGCCCGG
TACGGGATCG ACGGGGCCTA TGTCCCGCTG CCGGTGCGGC CGGGCCTGTT CGATGTCGCG
GTGCGCGGCT TGCAGGCGGC GGGCTTTCGC GGCGCCAACG TGACCATCCC GCACAAGGAA
GCGGCGTTCG CCATCGCCGA TCACCTGCAT CGCTCGGCGG TGCGTTCCGG GTCGGTCAAC
ACCCTGGTCT TCGCCGGGGA CGGCCGGATC GAAGCCCATT CGACCGATGG CGACGGCTTC
GTCGCCAATC TGGAAGCCCA CGGCGTCGAT GTCACGCGCG GTCCCGCCCT GGTGCTGGGC
GCCGGCGGTG CCGCGCGGGC GATCGTGGCC AGCCTGACGG ACAGGGGGAT TGCGGTTTCG
ATCGCCAACC GGACCCGCGC CCGGGCGGAA GATCTGGCCC ACGCGCTGGC ATCCCCCGAA
ACACGGATTG CCGTGACCGA CTGGGACCGC TGGACGGACG GCCTGCCGGA CCATGCCCTG
CTGGTCAACA CGACGTCGCT GGGCATGCAT GGCGGACCGG ACGACGTGTT CGCGCCCGAC
CTGGCGCGTG CGCCGGCCGG CATGGTGGTG GCCGACATCG TCTATGTTCC GCGCATGACC
CCGCTGCTGC GGGCCGCCGC CGCGCGGGGG CTGCCGGTGG TGGACGGAAC GGGCATGCTG
CTGCACCAGG CGCGACTGGG CTTTCGCGAA TGGTTCGGCG TCGATCCGGC AGTGGATGCC
GATATCCAGG CGCTGCTCGA CGCCGACCTG GCAGGGTGA
 
Protein sequence
MTGTAPMRRA IGGGTMLAGV IGWPVSHSRS PLLHNFWLAR YGIDGAYVPL PVRPGLFDVA 
VRGLQAAGFR GANVTIPHKE AAFAIADHLH RSAVRSGSVN TLVFAGDGRI EAHSTDGDGF
VANLEAHGVD VTRGPALVLG AGGAARAIVA SLTDRGIAVS IANRTRARAE DLAHALASPE
TRIAVTDWDR WTDGLPDHAL LVNTTSLGMH GGPDDVFAPD LARAPAGMVV ADIVYVPRMT
PLLRAAAARG LPVVDGTGML LHQARLGFRE WFGVDPAVDA DIQALLDADL AG