Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3384 |
Symbol | |
ID | 6976830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3708046 |
End bp | 3708924 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643392900 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_002277725 |
Protein GI | 209545496 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.442523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCA CCGCCCCCAT GCGACGGGCG ATCGGCGGCG GGACGATGCT GGCCGGAGTG ATCGGCTGGC CGGTATCGCA TTCGCGCTCG CCGCTGCTGC ATAATTTCTG GCTGGCCCGG TACGGGATCG ACGGGGCCTA TGTCCCGCTG CCGGTGCGGC CGGGCCTGTT CGATGTCGCG GTGCGCGGCT TGCAGGCGGC GGGCTTTCGC GGCGCCAACG TGACCATCCC GCACAAGGAA GCGGCGTTCG CCATCGCCGA TCACCTGCAT CGCTCGGCGG TGCGTTCCGG GTCGGTCAAC ACCCTGGTCT TCGCCGGGGA CGGCCGGATC GAAGCCCATT CGACCGATGG CGACGGCTTC GTCGCCAATC TGGAAGCCCA CGGCGTCGAT GTCACGCGCG GTCCCGCCCT GGTGCTGGGC GCCGGCGGTG CCGCGCGGGC GATCGTGGCC AGCCTGACGG ACAGGGGGAT TGCGGTTTCG ATCGCCAACC GGACCCGCGC CCGGGCGGAA GATCTGGCCC ACGCGCTGGC ATCCCCCGAA ACACGGATTG CCGTGACCGA CTGGGACCGC TGGACGGACG GCCTGCCGGA CCATGCCCTG CTGGTCAACA CGACGTCGCT GGGCATGCAT GGCGGACCGG ACGACGTGTT CGCGCCCGAC CTGGCGCGTG CGCCGGCCGG CATGGTGGTG GCCGACATCG TCTATGTTCC GCGCATGACC CCGCTGCTGC GGGCCGCCGC CGCGCGGGGG CTGCCGGTGG TGGACGGAAC GGGCATGCTG CTGCACCAGG CGCGACTGGG CTTTCGCGAA TGGTTCGGCG TCGATCCGGC AGTGGATGCC GATATCCAGG CGCTGCTCGA CGCCGACCTG GCAGGGTGA
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Protein sequence | MTGTAPMRRA IGGGTMLAGV IGWPVSHSRS PLLHNFWLAR YGIDGAYVPL PVRPGLFDVA VRGLQAAGFR GANVTIPHKE AAFAIADHLH RSAVRSGSVN TLVFAGDGRI EAHSTDGDGF VANLEAHGVD VTRGPALVLG AGGAARAIVA SLTDRGIAVS IANRTRARAE DLAHALASPE TRIAVTDWDR WTDGLPDHAL LVNTTSLGMH GGPDDVFAPD LARAPAGMVV ADIVYVPRMT PLLRAAAARG LPVVDGTGML LHQARLGFRE WFGVDPAVDA DIQALLDADL AG
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