| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3358 |
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| Symbol | |
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| ID | 6976801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 3677823 |
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| End bp | 3678995 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643392871 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002277699 |
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| Protein GI | 209545470 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00456117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.742173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA CCGCCCCCCT TTCCGACCCC AGCGACATCC CCGCATTCGA TACGTTGGGC
CTGGACCCGC GCATCGTGGC GAATGTCGCG CGGGCCGGCT ATGCCACCCC GTCGCCGATC
CAGGCCCTGG CCATTCCGCC GATCCGCGAC GGCCGCGATG TCGAGGCCCT GGCCCGCACC
GGAACCGGCA AGACGGCGGC CTTCGCCCTG CCGGTGATCC ATCGGTTGCT GACCGGTGCA
GGAGGCGCCG CACCTTCCGG GCCTCCGGGC GCGGTGCGGG CCCTGATCCT GTCGCCGACC
CGGGAACTGG CCAGCCAGAC CGCCGGCACC GTCCGGACCT GCATCCGCGG CTGCGGGCTG
ACGGTGGCGC TGGCCATCGG CGGGGCGCCC AAGGACCGGC AGGCACGCGC CTTGCTGGAC
GGCGTCGATA TCCTGGTGGC GACCCCGGGA CGCCTGCTGG ACCATCTGGC GGACGCAACC
ATCACGCTGG ACCATACGAC CTGCCTGGTG CTGGATGAGG CCGACCGGAT GCTGGACCTG
GGCTTCGTCG AGGATGTGCG GGCCATTGCG GCGCGCCTGC CGGTGCGGCA TCAGACCCTG
CTGTTTTCGG CCACCATGTC ACCCGCCATT TCGGCGCTGG GGCGGCAATT GCTGCACAAG
CCGCTGCAGA TCGCCCCGCC GGAGCAGGCC GCCCCGCCGC CGCGCATCCG CCAGCAGGTG
ATCTTCACCC CGGCCGCGCG AAAGGCCGCG TCCCTGCTTG CGGTGCTGCG CCGCGAGGCA
GGCGGCCGGA CAATGGTCTT CACCCGTACC AAACAGGCGG CCGACGCGCT GGCGCGGACG
CTGAATACGG GGGGCGTGAC CGCCGCCGCG CTGCATGGCG ACCACGGCCA GGTCCGGCGC
GACCGCACGC TGGACGATTT CCGTCGTGGC AGGCTGCTGG TGCTGGTCGC CACCGACGTC
ATGGCGCGCG GCATCGATGT CGAGGACGTG GCCCTGGTGG TCAATTTCGA TATCCCGGAG
CAACCCGAAA CCTATATCCA CCGGATCGGC CGCACCGCGC GGGCCGGACG GCGGGGCACG
GCGCTTTCGC TGTGCGATCC CGCCGAGCGG CTGAAGCTGC GCGACATCGA AAGACAGAGC
GGCGCGCGCA TCACCGTCAT CGATCCCACC TGA
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| Protein sequence | MTDTAPLSDP SDIPAFDTLG LDPRIVANVA RAGYATPSPI QALAIPPIRD GRDVEALART
GTGKTAAFAL PVIHRLLTGA GGAAPSGPPG AVRALILSPT RELASQTAGT VRTCIRGCGL
TVALAIGGAP KDRQARALLD GVDILVATPG RLLDHLADAT ITLDHTTCLV LDEADRMLDL
GFVEDVRAIA ARLPVRHQTL LFSATMSPAI SALGRQLLHK PLQIAPPEQA APPPRIRQQV
IFTPAARKAA SLLAVLRREA GGRTMVFTRT KQAADALART LNTGGVTAAA LHGDHGQVRR
DRTLDDFRRG RLLVLVATDV MARGIDVEDV ALVVNFDIPE QPETYIHRIG RTARAGRRGT
ALSLCDPAER LKLRDIERQS GARITVIDPT
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