Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3354 |
Symbol | glyA |
ID | 6976797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3672797 |
End bp | 3674095 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643392868 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_002277696 |
Protein GI | 209545467 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0554425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.88347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACC AGATGAGCCA GAGCGGGTTG CACGCCTATT TCCGCTCCCC GCTTGCCGAA CGCGATCCCC TGGTCGCGGA GATCATCGCG GGTGAACTGG AGCGCCAGCG CGACGGAATC GAACTGATCG CCAGCGAGAA CATGGTGTCC GAGGCGGTGC TGCAGGCGCA GGGCAGCGTG CTGACGAACA AATACGCCGA GGGTTATCCC GGCCGCCGCT ATTACGGCGG CTGCGCCGAG GTGGACAAGG TCGAGAGCCT GGCCATCGAG CGGGTGAAGA CGCTGTTCGG CGCGGGCTTC GCGAACGTGC AGCCCCATTC CGGCGCCAAC GCGAACCAGG CGGCGTTCAT GGCGCTGGTC AGCCCGGGCG ATACCATCCT GGGCATGAGC CTGGCGGCGG GCGGCCACCT GACGCACGGG GCGGCGCCGA ACTATTCCGG CAAATGGTTC CGCGCGGTGC AGTACGGCGT GCGGCGCGAG GACGGGCTGC TGGATTACGA GGAGATGGAG CGCCTGGCCC GGGCCGAGAA GCCGAAGCTG ATCGTGGCGG GGGGCTCGGC CTATCCGCGC GCGATCGATT TCGCCCGCTT CCGCGCCATC GCGGACGAAG TCGGGGCCTA CCTGATGGTC GACATGGCCC ATTATGCCGG ACTGGTCGCG GCGGGCCTGT ATCCCTCGCC GATGGCGCAT GCGCATGTGG TGACCAGCAC GACGCACAAG ACCCTGCGCG GCCCGCGCGG CGGCCTGATC CTGACGAATG ACGCGGACCT GGCGAAGAAG ATCAACTCGG CGGTCTTCCC CGGGCTGCAG GGCGGCCCGC TGATGCACGT GATCGCGGCC AAGGCCGTGG CGTTCGGCGA GGCGCTGCAG CCGGAATTCC GCGCCTATCA GGAAGCGGTG GCGGCGAATG CCCGCGTGCT GGCGGAAACG CTGCTGTCGC GCGGGTTCGA CATCGTGACG GGGGGCACGG ACAGCCACCT GCTGCTGGTG GACCTGCGCC CCAAGAAGGT CACGGGCCGC GCCGCCGAAC GCAGCCTGGA ACGCGCCGGG ATCACCGCGA ACAAGAACGC GGTGCCGTTC GACCCGGAAA AGCCGGCGAT CACGTCGGGG ATTCGCCTGG GCAGCCCCGC CGCCACGGCG CGCGGCTTCG GCACCGACGA ATTCCGCGCG GTGGGCGAGA TGATCGACGA GGTCCTGACC GCCATGGCCG GCAAGGGCGA GGACGGATGC CCCGCCACCG AACAGGCGGT GCACGACAAG GTCCGCGCCC TGTGCGCGCG CTTCCCGATC TATCGCTAG
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Protein sequence | MPDQMSQSGL HAYFRSPLAE RDPLVAEIIA GELERQRDGI ELIASENMVS EAVLQAQGSV LTNKYAEGYP GRRYYGGCAE VDKVESLAIE RVKTLFGAGF ANVQPHSGAN ANQAAFMALV SPGDTILGMS LAAGGHLTHG AAPNYSGKWF RAVQYGVRRE DGLLDYEEME RLARAEKPKL IVAGGSAYPR AIDFARFRAI ADEVGAYLMV DMAHYAGLVA AGLYPSPMAH AHVVTSTTHK TLRGPRGGLI LTNDADLAKK INSAVFPGLQ GGPLMHVIAA KAVAFGEALQ PEFRAYQEAV AANARVLAET LLSRGFDIVT GGTDSHLLLV DLRPKKVTGR AAERSLERAG ITANKNAVPF DPEKPAITSG IRLGSPAATA RGFGTDEFRA VGEMIDEVLT AMAGKGEDGC PATEQAVHDK VRALCARFPI YR
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