| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3346 |
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| Symbol | dnaE |
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| ID | 6976789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3660497 |
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| End bp | 3663925 |
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| Gene Length | 3429 bp |
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| Protein Length | 1142 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643392860 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_002277688 |
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| Protein GI | 209545459 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.103995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCACG CCGATTTCGT CCATCTTCGC GTTCATTCCG CCTATTCGCT CAGCCAGGGG
GCGATCCGCA TCCCCGAGAT CGCGTCCCTG GCGCAGGACA TGCGCATGCC GGCGGTGGCG
ATCACCGATA CCGGCAACCT GTTCGGGGCG CTGGAATTCT CGCAATATTG CTCGGGCAAG
GGGGTGCAGC CGATCATCGG CTGTCAGGTC GGCCTGCCGC CGCGCAACGA CAAGCCCGGC
GCGCCGGCCG AGCCCGTCGT CCTGCTGGCG CAGGACGAAA CCGGGCTGAT GAACCTGCAA
TACCTGTCTT CGCAGGGGTT CCTGACGGGC GACACCGCCG AGCCGACGGT GACGCTGGAC
GTGCTGTGCG AGCGGGCGGA GGGACTGATC CTGCTGACCG GCGGCACGCG CGGCCCGCTG
TTCCGCATGC TGGCCGACGG GCAGCAGGAC GAGGTCGCGC AGTGGCTGGA ACGGCTGCAC
GCCGCCTTCG GAGACCGGCT GGCGGTCGAA CTGCACCGGC ACGGGCTGCC GGTCGAAAAG
GCGGTCGAAC CCGGCATGAT CGCGCTGGCC GACCGGATGG GCCTGCCGCT GGTCGCGACC
AACGAATGCT TCTTCCCCCG GCCGGAGATG TACGAGGCGC ATGACGCGCT GCTGTGCATC
GCCCAGGGCC GCACGATGGC CGAGCGCGAC CGCTGGCGGG TCACGCCGGA ACATTGGTTC
AAGCCCCCCG CGATGATGCG CGACCTGTTC GCGGACCTGC CGGAAGCCTG CGACAACACG
CTGGCCATCG CCCGGCGCTG CGCGGTGCGG GTGGAAACCC GCAAGCCCCT GCTGCCGGTC
TGCCCCAAGG TGCAGCCGGG CGCGACCGAG GAGCAGACCC TGCGCGCCAT GGCCGAGGAC
GGGCTGGCCC GCCGGCTGGC GCGCATGGAC ATGGATGACG CGACCCGTCA GGTCTATCGC
GACCGGCTGA CGTTCGAGCT GGATATCATC GCGAAGATGG GCTTCCCCGG CTATTTCATG
ATCGTCGCGG ACTTCATCCA GTGGGCGAAG GCGCATGACA TTCCGGTGGG GCCGGGGCGC
GGATCGGGGG CGGGGTCGCT GGCGGCCTGG GCGCTGACGA TCACCGATAT CGACCCGATT
CCCTTCAACC TGCTGTTCGA ACGGTTCCTG AACCCCGAAC GCGTGTCGAT GCCCGACTTC
GACATCGATT TCTGCCAGGA CCGGCGGGAC GAGGTCATCC GCTACGTCCG CGGCGAATAC
GGTCCCGACC GCGTGGCGCA GATCATCACC TTCGGCAAGC TGCAGGCCCG GGCGGCGGTA
CGCGACGTGG GCCGCGTGCT GGGCCTGCCG TTCGGCATGG TCAACAAGGT CGCGGAACTG
ATCCCCAACA ATCCGGCCAA GCCCGTGACC CTGAAACAGG CGATCGACGG CGAGCCCCGC
CTGCAGGAGA TGCGCGATAC CGACGAGGCG ATCCGCCGCC TGATGGAAAT CGCGCTCCAG
CTCGAAGGGC TGTACCGCCA CGCCAGCACC CATGCGGCCG GCGTCGTGAT CGGCGACCGG
CAACTGGTCG AACTGGTGCC GCTCTACCGC GATCCCAAGA GCGACATGCT GGTCACCCAG
TACAACATGA AGTTCGTCGA GCAGGCGGGG CTGGTGAAGT TCGACTTCCT GGGCCTGACC
ACCCTGACCA TCCTGCAGCG CGCCTGCCAG TTCCTGAAGG GGCTGGACGT GACGGTCGAT
CTGACCACGC TGCCGCTGGA CGACGCCCCG ACGTACGAGA TGCTGGCGCG CGGCGACACG
GGCGGCGTGT TCCAGTTCGA AGGCGCGGGC ATGCGCGACG TGCTGAAGCA GATGCGCCCG
ACGCGGCTGG AGGACCTGAT CGCCGCCGTG GCGCTCTACC GTCCCGGCCC CATGGCCAAC
ATCCCCGATT ACTGCCGCCG CAAGCACGGC GAGGCGTGGG AGCCCCCGCA CGAGGAGATC
CGCTCGATCC TGGAAGAGAC CTACGGCATC ATGGTCTACC AGGAACAGGT GATGCAGATC
GCCCAGAAGA TGGCGGGCTA CAGCCTGGGC GGTGCCGACC TGCTGCGCCG CGCGATGGGC
AAGAAGATCC GCGCCGAGAT GGACAAGCAG CGCGAGATCT TCACCGAGGG CGCGGTCGGT
CGCGGCATCG ACCCCGAGAA GGCGGCCGAG GTCTTCGACC TGATGGCCAA GTTCGCGGAT
TACGGCTTCA ACAAATCCCA CGCCGCCGCC TATGCGCTGG TGTCGTACCA GACGGCGTGG
ATGAAGGCGA ACCATCCGGT GCCGTTCCTG GCCGCCTGCA TGTCTCTGGC GCGGGAAAAG
ACCGACAAGC TGGCGGCCCT GCGGCAGGAG GCCGAGCGGC TGGGCATTCC CGTCCTGCCG
CCCGACATCA ACGCATCGGG GCCGGATTTC ACCGTCGAGC GCCTGGCCGA CGGCCGCCTG
GGCATCCGCT ACGCGCTGGC GGCGGTCAAG AAGGTCGGAT TCGCGGCGAT GGAGGCCCTG
GTGGCGTCGC GCGGCGACCG TCCGTTCGCC GACCTGTCGG ACCTGGCGGC GCGTGTGGAC
CCGCGCCAGT TGAACAAGAT GCAGATCGAA AACCTGGCCA AGGCCGGGGC CTTCGACACG
GTGGTGCCCA ACCGCGCCCT GGTCGCGGCG GCGGCGGAGA CGGTCCTGCG CCGCGCCAAT
ACCCAGGCGC AGGAGGCCGC GAGCGGCCAG ATCGGCCTGT TCGGCGGCGG AGGGCCCACG
CCGGCGCCGG AACCGCTGCG CCTGCCGGAC GTGACCGACT GGCCGGAATT CGAACGGCTG
GGGATGGAGG CCGAGGCCAT CGGCTTCCAC CTGACGGCGC ATCCGCTCGA TTCATACGGC
CTGCTGCTGC GCCGCCTGGG GGCCGTGCGC GCCACGGCGC TGGAGGCCGC CGCCCAGGCC
GGGCTGACGC GGGTCAAGAT CGCCGGCTGC GTGGTCGACC GCAAGGAACG CCCGACCCGC
ACCGGCAGCA AGATGGCCTG GGTGCGCCTG TCCGATTCCA GCGGCGGGTG CGAGGTCACG
CTGTTTTCCG AGGTCCTGTC GCGCACCCGC GACATCCTGA CCGCCGGCAC CGCCGTGCTG
GTGACGGCCG ATCTGCGCCT GGACGGCGAG GCCCTGCGCA TCACCGGCAG CGACGTGGTG
GCGCTGGAAC AGGCGGCGGC CGACGCGGCG GCGGAACTGC GCATCTGGTT CGACCGCGAG
GACGCGATCA CCCCGATCCA CGCCATCCTG TCCGAGGAGA AGGGGGGGCG CGGCAAGGTC
ATCCTGCTGC CGTCGGTGGC CGAAACCCGC GATGTCGAGG TGCGGCTGGG CGGCGCCTAT
CGCGTCACGC CGCGCATGGC CCAGATGATC AAGGCCGTCG CCGGCGTGGC CCGGGTCGAA
CAGGGATAG
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| Protein sequence | MPHADFVHLR VHSAYSLSQG AIRIPEIASL AQDMRMPAVA ITDTGNLFGA LEFSQYCSGK
GVQPIIGCQV GLPPRNDKPG APAEPVVLLA QDETGLMNLQ YLSSQGFLTG DTAEPTVTLD
VLCERAEGLI LLTGGTRGPL FRMLADGQQD EVAQWLERLH AAFGDRLAVE LHRHGLPVEK
AVEPGMIALA DRMGLPLVAT NECFFPRPEM YEAHDALLCI AQGRTMAERD RWRVTPEHWF
KPPAMMRDLF ADLPEACDNT LAIARRCAVR VETRKPLLPV CPKVQPGATE EQTLRAMAED
GLARRLARMD MDDATRQVYR DRLTFELDII AKMGFPGYFM IVADFIQWAK AHDIPVGPGR
GSGAGSLAAW ALTITDIDPI PFNLLFERFL NPERVSMPDF DIDFCQDRRD EVIRYVRGEY
GPDRVAQIIT FGKLQARAAV RDVGRVLGLP FGMVNKVAEL IPNNPAKPVT LKQAIDGEPR
LQEMRDTDEA IRRLMEIALQ LEGLYRHAST HAAGVVIGDR QLVELVPLYR DPKSDMLVTQ
YNMKFVEQAG LVKFDFLGLT TLTILQRACQ FLKGLDVTVD LTTLPLDDAP TYEMLARGDT
GGVFQFEGAG MRDVLKQMRP TRLEDLIAAV ALYRPGPMAN IPDYCRRKHG EAWEPPHEEI
RSILEETYGI MVYQEQVMQI AQKMAGYSLG GADLLRRAMG KKIRAEMDKQ REIFTEGAVG
RGIDPEKAAE VFDLMAKFAD YGFNKSHAAA YALVSYQTAW MKANHPVPFL AACMSLAREK
TDKLAALRQE AERLGIPVLP PDINASGPDF TVERLADGRL GIRYALAAVK KVGFAAMEAL
VASRGDRPFA DLSDLAARVD PRQLNKMQIE NLAKAGAFDT VVPNRALVAA AAETVLRRAN
TQAQEAASGQ IGLFGGGGPT PAPEPLRLPD VTDWPEFERL GMEAEAIGFH LTAHPLDSYG
LLLRRLGAVR ATALEAAAQA GLTRVKIAGC VVDRKERPTR TGSKMAWVRL SDSSGGCEVT
LFSEVLSRTR DILTAGTAVL VTADLRLDGE ALRITGSDVV ALEQAAADAA AELRIWFDRE
DAITPIHAIL SEEKGGRGKV ILLPSVAETR DVEVRLGGAY RVTPRMAQMI KAVAGVARVE
QG
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