| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3322 |
|---|
| Symbol | |
|---|
| ID | 6976762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3631832 |
|---|
| End bp | 3633310 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643392833 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_002277664 |
|---|
| Protein GI | 209545435 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0650972 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGTA CCTGTACGTC GCTTCTTCTT CCCGATCCCA CGCAGATGGG GCTGATCGAC
CGCGCCGCCA GCCGCACCGT GCCGGTGCGC GACCTGATGG AAAACGCGGG CCGGGCCGTG
GCGCGGGCCG TGCTGCGGCA TGTCAGGCCG TGCCGGGTGC TGGTCCTATG CGGCCCGGGG
AATAACGGCG GCGACGGCTA TGTCGCCGCC CGCCGGCTGG TCCAGGCCGG CTGGCCGGTC
GCGGTCGCCG CCCTGGCGCC GCCCCGTCCG GGCGGGGACG CGGCCGCCGC CGCCGCCGAC
TGGCGCGGCC CCCGCGTACC CTTCACGGCG GAAGAGGCCG CGCGGGCCGA CCTCGTGGTC
GATGCGGTGT TCGGCGCCGG CCTCAGCCGC GATATCGATG CCGGCCTGGC ATCGGTGCTG
GCGGCGGCCC GCCGCGTGGT CGCGGTGGAC ATGCCCAGCG GCATCGACGG CGGCACCGGC
GCGGTCCGGG GCTATGCCCC GCACGCCGAA ATGACGGTCA CGTTCGTGCG CGCCAAGCCG
GGCCATCTGC TGCTGCCGGG GCGCGAGCGG CTGGGGCGGC TGGTGGTGGC GGATATCGGC
ATGCCCGACA CGGTCTGGGA CGCGGTGGAC ATCCGCACCT GGCGGAACGA GCCAGGGCTG
TGGCGGGTGC CGGGCGACGC GGTGGACAGT CACAAATACG CGCGCGGCGT CGTCAGCATC
TGCGGCGGCG CCACGATGCC GGGCGCCGCC CGCCTGTCCG CCGCCGGGGC CCGGGCGGCG
GGCGCGGGGC TGGTGCGTCT GGCGGCGGGG GCGGCAGCGG ATCTGTACCG GCTGGGCGAA
CCCGGGCTGG TGGTCGATGG CGGCGACCTG ACCGACCTGC TGGCCGACCG GCGCCGCGCG
GTCTGGGTCT GCGGCCCCGG CCTGACGGTG GACGAGGTCG ATCATACATT GCCGATCCTG
GTCGGGGCGG GGCGCACGGT GCTGGCCGAT GCCGGGGCCT TTGCCGTGGC GGCGGACCAG
CCGGACCGGC TGCGGGGGGT GGCGGTGATC ACCCCGCATG CCGGGGAATT CGCCCGCGTG
TTCGGCCATC CCGGCGACGA CAGGCCGGCG GCCGCGCGCG CCGCCGCCGC GCGAACCGGC
GCGGTGGTGG TGCTGAAGGG CCCCGATACC GTGGTCGCCG CGCCGGACGG GCGGGTCGCG
ATCAATGCCC ACGCGTCCTC GGCGCTGGCC ACCGCCGGGT CGGGCGACAC GTTGACCGGG
GTGATCGCGG CATTGCTGGC GGCGGGGATG GAGCCGTGGC CGGCCGCCTG CGCCGGGGTG
TGGATGCATG GCGAAGCCGG GATGCGGGCC GGCCCCTGGC CGCTGGCCGA ACAGTTCGAC
CAGCATCTGG GCGCCGCGCG GGCGCGGGCG GTGGAACTGG GCGCGCGGCG CCCGGCCTAT
CGGCATTGTC GGCTTGCCGG ATCGGGTCTC GTGCGCTAA
|
|---|
| Protein sequence | MDGTCTSLLL PDPTQMGLID RAASRTVPVR DLMENAGRAV ARAVLRHVRP CRVLVLCGPG
NNGGDGYVAA RRLVQAGWPV AVAALAPPRP GGDAAAAAAD WRGPRVPFTA EEAARADLVV
DAVFGAGLSR DIDAGLASVL AAARRVVAVD MPSGIDGGTG AVRGYAPHAE MTVTFVRAKP
GHLLLPGRER LGRLVVADIG MPDTVWDAVD IRTWRNEPGL WRVPGDAVDS HKYARGVVSI
CGGATMPGAA RLSAAGARAA GAGLVRLAAG AAADLYRLGE PGLVVDGGDL TDLLADRRRA
VWVCGPGLTV DEVDHTLPIL VGAGRTVLAD AGAFAVAADQ PDRLRGVAVI TPHAGEFARV
FGHPGDDRPA AARAAAARTG AVVVLKGPDT VVAAPDGRVA INAHASSALA TAGSGDTLTG
VIAALLAAGM EPWPAACAGV WMHGEAGMRA GPWPLAEQFD QHLGAARARA VELGARRPAY
RHCRLAGSGL VR
|
|---|
| |