Gene Gdia_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3300 
Symbol 
ID6976740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3605982 
End bp3607811 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content68% 
IMG OID643392811 
ProductABC transporter related 
Protein accessionYP_002277642 
Protein GI209545413 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0999456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGC CCCCATCCCA TACCGGGCGC GCGCCGGAAC GCCCGGTGCG CGAGACCCTG 
CGCGCGCTGC TGCCCTATCT CTGGCCCCGC GACGATCCCC GCACCCGCCT GCGCGTGGCG
GGGGCATGCG CCCTGCTGAT CGCCGCCAAG GTCGCGACGA TCTGCGTGCC GTATCTCTAC
AGCCGGGTGG TCGATGCGCT GCACGGCCTG GACGGTGCCG GCGTGGCGGC CATCCCGCTG
GCGCTGATCG GCGGGTACGG GCTGCTGCGG CTGCTGTCGG CCGGCCTGGG GGAATGGCGG
GACGCGCTGT TCGCCCCGGT GCGCTGCCGC ATCAGTTGCG CCGCGGCCAT CCGCAGCTTC
CGGCACATGC ATGCCCTGTC GCTGCGCTTC CACCTGGACC GCCAGTCGGG TGGCGTGACC
CAGGCCATCG CACGCGGGAC CGAGGCGATC GAAACGATCC TGCGCGTCGG CGTCTTCAAT
GTGGTGCCCA CGCTGATCGA GGCGCTGATG GTCATCGCGG TCATCTGGCG CCTGTTCGAC
TGGCGCTATG CCGTCATCAT GCTGGCCGCG GTCGCGGCCT ATGTCGGCTT CACGGTCAGC
TTCACGTCCT GGCGCATCGG CATCCGGCGC GTGATGAACG ACATCAATAC CGAGGCAAGC
TGGAAGGCGC TGGACAGCCT GCTGAACTAC GAGACGGTCA AGTATTTCGG CAACGAGGAG
CATGAAAGCC ACCGGTACGA GGAGGCCCAG CGCCGCTACG AACGCGCCGC CGTGCGGACC
CAGGTATCGC TGAACGGGCT GAATTTCGGG CAGGCGGCCA TCATCGCGGT GACGCTGACC
CTGGTCATGC TGCTGGCGGC GCACGACGTG GCGCAGGGGC GGCTGACGGT CGGGCGGTTC
GTGCTGGTCA ATACCTACCT GATGCAGCTC TACCTGCCGC TGAATTTCCT GGGCAGCATC
TATTCGTCGC TGCGGACGGC GCTGGTGGAC CTGGAGCAGA TGTTCCGGCT GACCGACGAA
ACGCCCGAAA TCGTCGACCG GCCGGATTCG ATCGGCCTGC CCGCCCGGCT GGACGAGGCA
CCGGCGGCGG CGATCCGCTT CGAGCATGTC CGCTTCGCCT ACCGGCCGGA CCGCGAGATC
CTGCACGATG TCAGCTTCAG TGTTCCGGCG GGCGGCCGGG TGGCCATCGT CGGCCCCACC
GGCGCGGGCA AATCGACCAT CAGCCGCCTG CTGTTCCGTT TCTATGACGT CAGTTCGGGC
CGGATCGTGG TGGACGGGCA CGACGTGCGC GACTACGCCC AGGCGGCGCT GCGGGCGGCG
ATCGGCGTGG TGCCGCAGGA TACGGTGCTG TTCAACGACA CGATCGGCTA CAACATCGCC
TATGGCCGCC TGGGGGCGTC GCGGGACGAG ATCGAGCACG CGGCCCGGCT GGCGCAGATC
CATGATTTCA TCGTCAGCCT GCCAGACGGA TACGCGACCC GGGTGGGCGA GCGCGGGCTG
AAGCTGTCGG GGGGCGAGAA GCAGCGCGTG GCCATCGCGC GCACCATCCT GAAGAACCCG
CGCATCCTGA TCCTGGACGA GGCCACCAGC GCGCTGGACA CCCACACCGA ACAGGAAATC
CAGACCGCGC TGCGCACGGT TTCGGCCGAG CGGACGACCG TCATCATCGC CCACCGTCTG
TCGACCGTGG TCGATGCGGA TGAAATCCTT GTGATGGGAG AGGGCGTGAT CCAGGAACGC
GGTACCCATC GCAGCCTGCT GGCCCGCGAC GGACTTTATG CCCGCATGTG GGCGGCCCAG
GCCGAGGAGC GCGAGGACGA GGAAGTATAG
 
Protein sequence
MTPPPSHTGR APERPVRETL RALLPYLWPR DDPRTRLRVA GACALLIAAK VATICVPYLY 
SRVVDALHGL DGAGVAAIPL ALIGGYGLLR LLSAGLGEWR DALFAPVRCR ISCAAAIRSF
RHMHALSLRF HLDRQSGGVT QAIARGTEAI ETILRVGVFN VVPTLIEALM VIAVIWRLFD
WRYAVIMLAA VAAYVGFTVS FTSWRIGIRR VMNDINTEAS WKALDSLLNY ETVKYFGNEE
HESHRYEEAQ RRYERAAVRT QVSLNGLNFG QAAIIAVTLT LVMLLAAHDV AQGRLTVGRF
VLVNTYLMQL YLPLNFLGSI YSSLRTALVD LEQMFRLTDE TPEIVDRPDS IGLPARLDEA
PAAAIRFEHV RFAYRPDREI LHDVSFSVPA GGRVAIVGPT GAGKSTISRL LFRFYDVSSG
RIVVDGHDVR DYAQAALRAA IGVVPQDTVL FNDTIGYNIA YGRLGASRDE IEHAARLAQI
HDFIVSLPDG YATRVGERGL KLSGGEKQRV AIARTILKNP RILILDEATS ALDTHTEQEI
QTALRTVSAE RTTVIIAHRL STVVDADEIL VMGEGVIQER GTHRSLLARD GLYARMWAAQ
AEEREDEEV