Gene Gdia_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3296 
Symbol 
ID6976736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3601203 
End bp3602348 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content68% 
IMG OID643392807 
Productprotein of unknown function UPF0118 
Protein accessionYP_002277638 
Protein GI209545409 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.854034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.185219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATC AGCCCCCCTC GCCCCTTCTG CCGCCTCCCG ACCGCTCCCC CTTCCGCCTG 
ATGCGCGAAC GCCATCGCGT GCAGCGCGTC GCCCGCTTCC TGCTGGCGAT GTTCTTCACC
CTGCTGGCGC TCTACACGAT CCGGGGCTTC CTGCCGTCCC TGATCTGGGG CGGGATTTTC
GCCATCGTGG CCTGGCCGCT CTATGCCGCC ACGCGGGAAC GCTGGAAATC GCTGCCGGGC
GGCACGATCC TGCCGCTGCT GTTCACCACC GGGATCGCCC TGATCTTCCT GGTGCCGATG
GGATTGTTCG CCCTGGAAGC CGCGCGTGAG GCCCAGAGCG TCGTGACCTG GGCGAACGAG
GCCCGGCATT CCGGCATGCC CGTGCCCGGC TGGATCCAGC GCCTGCCCCT GGGCTCCGCT
ACGCTGGCCG GCTGGTGGCA GGACCATCTG GCGAATCCGG ACGACGTGTC GGACCTGCTG
CATTCGTTCA ATATCGGGCA TGGCATGCAG GTGACGCAGC GCGTCGGGAC GCAGATCTTC
CATCGCGGCG TGCTGTTCAT CTTCGCGATC CTGACCCTGT TCTTCCTGCT GAAGGACGGC
GAAAGCGTGA CCCGCCAGTG CCTGGTCGTC TCGCGCCGGG CCTTCGGCAA GCGGGGCGAG
ACCATCGCCC AGCAGATCAT CGCCTCGATC CACGGGACGG TGGCCGGCCT GGTGCTGGTG
GGCCTGGGTG AAGGCGCGCT GATGGGGGTG GCCTACCTGA TCGCGGGCGC TCAGCATCCG
TTCCTGTTCG GCGTGTTCAC GGCCGTCGCG GCCATGATCC CGTTCTGCGC CGTCATCGCC
GTGGCGGCGG TGACGCTGAT GCTGCTGGTC AAGGGGGCGA CGATCGCCGC CATCGCCATC
CTGGCGCTGG GGCTGGCCGT CATTTTCATC GCCGACCATT TCGTCCGGCC CGCGCTGATC
GGCGGATCGA CCCAGATGCC ATTCCTGTGG GTCCTGACCG GCATCCTGGG CGGCGTGGAA
AGCTGGAACC TGCTGGGCCT CTTCGTGGGC CCGGCCATCA TGTCCGTCCT GCACCTGCTG
TGGCGCAACT GGACGCGCGA CCGCGTCCAG GATGGCCTGC GGGAAGAGGC TGACGATTTG
TGCTGA
 
Protein sequence
MTDQPPSPLL PPPDRSPFRL MRERHRVQRV ARFLLAMFFT LLALYTIRGF LPSLIWGGIF 
AIVAWPLYAA TRERWKSLPG GTILPLLFTT GIALIFLVPM GLFALEAARE AQSVVTWANE
ARHSGMPVPG WIQRLPLGSA TLAGWWQDHL ANPDDVSDLL HSFNIGHGMQ VTQRVGTQIF
HRGVLFIFAI LTLFFLLKDG ESVTRQCLVV SRRAFGKRGE TIAQQIIASI HGTVAGLVLV
GLGEGALMGV AYLIAGAQHP FLFGVFTAVA AMIPFCAVIA VAAVTLMLLV KGATIAAIAI
LALGLAVIFI ADHFVRPALI GGSTQMPFLW VLTGILGGVE SWNLLGLFVG PAIMSVLHLL
WRNWTRDRVQ DGLREEADDL C