| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3277 |
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| Symbol | |
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| ID | 6976716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3586637 |
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| End bp | 3587203 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643392787 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_002277619 |
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| Protein GI | 209545390 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.399714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCGCG AGCGTATCCT GATGGGTGTG GTGGGACGTC CGCATGGCGT GCGGGGGCTG
GTGCGCGTGC ACAGCTACGC CGCCGTGCCG GAGGACCTGA CCGCCTATGG GGCGCTGATC
GACGAGCACG GACAGGTCTG GAGCCTGCGC TGGCGGGGTG ACGGCATTGC CGAGCTGCGC
GACGCGGCGG GGCAGGCCCT GTCGGGCCGC GACGCCGCGC AGGCAATGGT CAACCGGCGC
CTCTATGTCG CGCGGACCAG CCTGCCGGAG CCCGATCAGG ACGAATTCTA CTTCACCGAC
CTGATCGGCA TGGATGTCCG CGCCCAGGGC ACCGACGCGC CGCTGGGCCG CGTGCTGGTC
GTCCATGATT ACGGCGCGGG GGTCAGCCTG GAACTCGGTG GCCAGGGGCA TGCACCCCTG
ATCCTGCCGT TCACCCGGGC GTGCTTTCCG GTGGTCGACG TCGCCGCCGG CCGGATCGAG
GCGGTCCTGC CGGACGAGAT CGAGGTGCAG GGCGACCTGT CCGACAAGGG CGAGGTCGAG
GTTTCGGCAA CCGGGGGTGC GTCATGA
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| Protein sequence | MDRERILMGV VGRPHGVRGL VRVHSYAAVP EDLTAYGALI DEHGQVWSLR WRGDGIAELR
DAAGQALSGR DAAQAMVNRR LYVARTSLPE PDQDEFYFTD LIGMDVRAQG TDAPLGRVLV
VHDYGAGVSL ELGGQGHAPL ILPFTRACFP VVDVAAGRIE AVLPDEIEVQ GDLSDKGEVE
VSATGGAS
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