| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3263 |
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| Symbol | |
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| ID | 6976702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 3573367 |
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| End bp | 3575289 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643392773 |
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| Product | oligopeptide transporter, OPT family |
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| Protein accession | YP_002277605 |
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| Protein GI | 209545376 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.697276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTC GCGGCCTCGT CCTCGGCGCC CTGATCACCA TCGTCTTCAC GGCCTCGAAC
ATCTATCTGG GACTGAAGAT CGGCCTGACC GTCGCCTCCT CGATCCCGGC GGCGGTGATC
TCGATGTCCG TGCTGCGGAC CATGGGCGGC GCGACGATCC TGGAGAACAA CCTGGTCCAG
ACCCAGGCCT CGGCGGCGGG AACGCTGTCA TGCGTCTTCA TCTCGTTCCC CTGCCTGGTC
ATGATCGGCC ACTGGCAGCA TTTCCCGTAC CTGGAGACGA CGCTGCTGTC GCTGGCCGGG
GGCATGACGG GGGTGCTGTT CACCGTTCCG CTGCGCCGCG CCATGGTGAC GCACAGCAGC
CTGCCCTATC CCGAAGGGGT CGCGGCGGCG GAAATCCTGA AGGCGGGATC GGAAGGCGGC
AATCCCGACA GCCTGAAGGC GCTGATGACC GGCGGCCTGG TCTCGGCGGT CGTGACGTTC
GCGACCGGCG GGCTGCGGCT GCTGTCGGAC GGCGCGTCGG CGACGGCGGT ATGGGGCGGC
GCGGTCTTCC GGGCCTCGAC CGGCTTTTCC CTGGCCCTGC TGGGCGCGGG CTACCTGGTC
GGAATCGCCG GCGGGCTGGC CATGCTGGTC GGCGCGATCA TCGCCTGGGG CATCGCGGTG
CCGGTGCTGA GCACCATGCT GCCCAACACC GCGCACCTGG CGCCCGCCGC CTTCGCCACC
CAGGTCTGGG CGCAGAAGGT CCGCTTCATG GGGGCGGGCA CGATCGGCGT CGCGGCCATC
TGGACGCTGG CCATGCTGGC GCAGCCGGTG GCGGCGGGCA TCCGCGACAT GCTGCGCGCC
GGCCGGTCGG TCGGCGAGGA CAGCCAGTCC CGCGACCTGT CGCCCCGGAC CATGGTGCTG
CTGACCGGCG TGTCGCTGGC CATCCTGTTC GGCCTGTTCG TCGCCTTCCA GGCGCCGATC
ATGGGGGCGC CGGGCGCGGC CGAGCATGCG ATCATCGGCG CGGCGCTGGC GGCGGTGCTG
TTCTGCGCGC TGTTCGGCTT CCTGATAGCC GCCGCCTGCG GCTACATGGC CGGGATCGTG
GGGTCGTCAT CCTCCCCCCT GTCGGGGATC GCCATCATCG CGGTCGTCAT GATCGCCCTG
TTCCTGCTGG GGCTGGAGCA GGTGGGCCTG CTGCCGGCCC AGATGTCGGC GAACGGGCAT
CACCTGGCCA TCGCCTTCGC CCTGTTCATC CTGTCCGCGA TCGTGGCGTC GTCGGCCATT
TCCAACGACA ACCTGCAGGA CCTCAAGACC GGGCAACTGG TCGGGGCGTC GCCCTGGCGG
CAGCAGGCCG CGCTGCTGGT GGGCTGCATC AGCGGCGCGG TCGTCATCCC GCCGGTGCTG
GAACTGCTGT ACCAGGCCTA TGGCTTCGTG GGCGCGATGC CGCGCGCGGG CATGAATCCG
GACCATGCCC TGGCGGCGCC GCAGCCCGCC CTGCTGGTCA CGATCGCGAC CGGCATTTTC
CAGCACCAGC TGGACTGGAA CATGATCGTG CTGGGCGCTG GCCTGGGGGG CGTGCTGATC
GCGGCCGACC TGCTGCTGCG CCGCTGGGCG CGCGCGCTGC CGCCGCTGGC AGTGGGGATC
GGCCTGTACC TGCCGCCTGC GGTCAGCGTG ACCCTGGCGA TCGGGGCCGT GCTGGGCTGG
GCCTGCACCC GGCGGCGCCC CAGCCTGCGG GCGGAAACCG GAATCGGCAC CATGCTGGCG
TCGGGCTTCA TCGTGGGCGA GAGCCTGACC GGCGTGCTGC TGGCCGCCGT GGCCGGGGCC
ACCGGCCGCG ACGATACGCT GTCCGTGCTG CCCGCCGGAG CCGACGCGAT GCCCATGGTT
CTGGGATTCC TGGTCTTCGT CGCCATATGC ACATGGTTCG GACGCAGCAT CCGCCGCGTG
TGA
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| Protein sequence | MTIRGLVLGA LITIVFTASN IYLGLKIGLT VASSIPAAVI SMSVLRTMGG ATILENNLVQ
TQASAAGTLS CVFISFPCLV MIGHWQHFPY LETTLLSLAG GMTGVLFTVP LRRAMVTHSS
LPYPEGVAAA EILKAGSEGG NPDSLKALMT GGLVSAVVTF ATGGLRLLSD GASATAVWGG
AVFRASTGFS LALLGAGYLV GIAGGLAMLV GAIIAWGIAV PVLSTMLPNT AHLAPAAFAT
QVWAQKVRFM GAGTIGVAAI WTLAMLAQPV AAGIRDMLRA GRSVGEDSQS RDLSPRTMVL
LTGVSLAILF GLFVAFQAPI MGAPGAAEHA IIGAALAAVL FCALFGFLIA AACGYMAGIV
GSSSSPLSGI AIIAVVMIAL FLLGLEQVGL LPAQMSANGH HLAIAFALFI LSAIVASSAI
SNDNLQDLKT GQLVGASPWR QQAALLVGCI SGAVVIPPVL ELLYQAYGFV GAMPRAGMNP
DHALAAPQPA LLVTIATGIF QHQLDWNMIV LGAGLGGVLI AADLLLRRWA RALPPLAVGI
GLYLPPAVSV TLAIGAVLGW ACTRRRPSLR AETGIGTMLA SGFIVGESLT GVLLAAVAGA
TGRDDTLSVL PAGADAMPMV LGFLVFVAIC TWFGRSIRRV
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