Gene Gdia_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3243 
Symbol 
ID6976682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3553244 
End bp3554446 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content67% 
IMG OID643392754 
Productaminotransferase class I and II 
Protein accessionYP_002277586 
Protein GI209545357 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.922268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTTA TCGCCGCCCG TCTGAACAAG GTCAGCCCCA GCCAGACCAT CGCCATCTCC 
ACCAAGGCGC GCGCCTTGAA GGAAGCCGGA CAGGACGTCA TCAGCCTGTC GGCCGGCGAG
CCCGATTTCG ACACCCCCCG GAACATCAAG GACGCGGCGA TCCGCGCCAT CGAAGCGGGC
CAGACGAAAT ATACCGACGT CGCCGGCACG CTGCCGCTGC GCCGGGCCGT GACCGAGCGG
TTCCGCATCG ATTCCGGCCT GGATTACACA CCGGACGAGA TCATCGTTTC CACCGGCGGC
AAGCAGGTGA TCTACAACGC CATGGTCGCG ACGCTGAATG CGGGGGACGA GGCGATCATC
CCCGCGCCGT GCTGGGTGTC CTATCCCGAT ATCGTGGCGC TGGCCGATGG CGTGCCCGTC
ATCGTCCCGT GCGCGGCGGA GACCGGGTTC AAGCTGCGGG CGGCCGACCT GGAGGCCGCC
ATCACGCCCC GGACCAAGTG GTTCTTCCTG AACTCGCCCT GCAACCCGAC CGGCGCCGCC
TATTCGGCCG AGGACCTGCG GCCGATCTGC GACGTGCTGC TGCGGCACCC GGATGTCTGG
ATCTTCACCG ACGATATCTA TGACAAGCTG GTCTATGACG GGTTCACGCC CGCCACCATC
GTGCAGGTCG AACCCCGGCT GCGCGACCGG ACGGTGACGA TGAACGGTGT GTCCAAGGCC
TATGCCATGA CCGGCTGGCG CATCGGCTTT TCCGGCGCGC CGGCCGTGCT GACGCGCGCG
ATGAACAAGC TGCAGAGCCA GTCGACCTCG GGCACCTGCT CGATCAGCCA GGCGGCGGCG
CTGGAGGCCC TGTCCGGCCC GCAGGACTTC ATCGGCGACA TGGTGCGCGC CTACCAGGAC
CGCCGCGACC TGGTGGTGGG CATGATGAAC CAGGCGCGCG GCCTGACCTG TTCCCGGCCC
GAGGGCGCGT TCTACGTCTT CCCGTCGATC GAGGGATGCC TGGGCAAGGT CAGCGCCGGC
GGGACGGCCA TCGTCGATGA CGAGGCCTTC GTCACCGCCC TGCTGGAGGA AGAGGGCGTG
GCGGCGGTGC ATGGCGCGGC CTTCATGTTC GCCGGCCATT TCCGCATTTC CTACGCGACC
GATACCGAAA GCCTGCGCGA AGCCTGCACC CGCATCCAGC GCTTCTGCGC CGGGTTGCGC
TGA
 
Protein sequence
MDLIAARLNK VSPSQTIAIS TKARALKEAG QDVISLSAGE PDFDTPRNIK DAAIRAIEAG 
QTKYTDVAGT LPLRRAVTER FRIDSGLDYT PDEIIVSTGG KQVIYNAMVA TLNAGDEAII
PAPCWVSYPD IVALADGVPV IVPCAAETGF KLRAADLEAA ITPRTKWFFL NSPCNPTGAA
YSAEDLRPIC DVLLRHPDVW IFTDDIYDKL VYDGFTPATI VQVEPRLRDR TVTMNGVSKA
YAMTGWRIGF SGAPAVLTRA MNKLQSQSTS GTCSISQAAA LEALSGPQDF IGDMVRAYQD
RRDLVVGMMN QARGLTCSRP EGAFYVFPSI EGCLGKVSAG GTAIVDDEAF VTALLEEEGV
AAVHGAAFMF AGHFRISYAT DTESLREACT RIQRFCAGLR