Gene Gdia_3241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3241 
Symbol 
ID6976680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3551475 
End bp3552035 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content60% 
IMG OID643392752 
ProductHNH endonuclease 
Protein accessionYP_002277584 
Protein GI209545355 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.118071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.690575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTGCTG GCAGTCCACA TTATCCGGCC CTGGTTCTGA ATGCCGATTT CAGGCCGCTT 
TCCTACTTTC CACTGTCGCT GTGGTCCTGG CAGGACGCGA TCAAGGCGGT GTTCCTGGAC
CGCGTTTCGG TCCTGAGCGA ATATGACGAG GAAGTACGGT CCCCCAGCCG GTCTCTCCGA
TTACCCAGCG TCATCGCCCT GAAGGATTAT ATCCCGACCG CTCGCCGCCC CGCCTTTACC
CGGTTCAACG TTTTCCTGCG CGACAATTTT TCCTGCCAAT ATTGCCTGGA CCGCCTGCCG
ACCCACGACC TGACGTTCGA TCACGTCATC CCCCGCTGCA AGGGGGGCCG GACGACCTGG
GAAAATGTCG TCACCGCGTG CAGCCCCTGC AACCTGATGA AGGGCTCGCG CATGCCGCAC
GAGCTGAAGA TGTATCCCCG CCGCACGCCC TCGCAGCCTT CCACCTGGGA ATTGCAGGAA
AACGGCCGCT CGTTCCCTCC CAACTATCTG CATGAAAGCT GGCGGGACTA TCTGTACTGG
GACAGCGAAC TGGATACCTG A
 
Protein sequence
MLAGSPHYPA LVLNADFRPL SYFPLSLWSW QDAIKAVFLD RVSVLSEYDE EVRSPSRSLR 
LPSVIALKDY IPTARRPAFT RFNVFLRDNF SCQYCLDRLP THDLTFDHVI PRCKGGRTTW
ENVVTACSPC NLMKGSRMPH ELKMYPRRTP SQPSTWELQE NGRSFPPNYL HESWRDYLYW
DSELDT