| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3174 |
|---|
| Symbol | |
|---|
| ID | 6976612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 3476768 |
|---|
| End bp | 3478177 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643392686 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
|---|
| Protein accession | YP_002277519 |
|---|
| Protein GI | 209545290 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
|---|
| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTTC TGTGGACCCG CGCGGCACTG CAGGACGCGA CCGGCGGCAC GTTCACGGGG
CAGGCGCCGG TTGCAGTCAC CGGGGTGTCG ATCGACACCC GCACGCTGGC CCCGGGCGAC
CTGTTCATCG CGCTGGCGGG CGAAAACAGC GATGGCCATG CCCACGTCCG CGCGGCCCTG
GACCAGGGCG CCGCCGCCGC CATGATCCAT GACCCGACTG TCCTGGGCAC CGATTCCGAC
GATCCGCGCC TGCTGCGCGT GCCCGACACG ATGGCGGCGC TGAACGCGCT GGGGCGCTAT
GCCCGCACCC GCTTCACCGG CCGGATGGTC GCCGTCACCG GCAGCGTGGG CAAGACCACG
ACCAAGGAGA TGCTGCGCCT GGCGCTGGGC GCGATCGGGC CGACCCATTG CGCCGCCGCG
TCCTACAACA ACCATTGGGG CGTACCGCTG ACGCTGGCCC GCCTGCCGAT GGATGCCGCC
TTCTGCGTCT GCGAGGTGGG CATGAACCAC CCCGGAGAAA TCGCGCCGCT GGCGGTGATG
GTCCGGCCGC TTGTCGCCCT CGTCACCACC ATCGCCGGCG CCCATCTGGG CCATATGGGC
AGCCTGGAGG CCATCGCGAG GGAAAAATCC GACCTGATCG CGACCCTGCC GCCCGCCGGC
ATCGCCATTG TCCCCGATGA CGCCACGGGC CAGCCGATCT TCGCCGAACA GGCGGCGCGG
GCACGGGCCA CATTGTGGCG GGCCGGCGAA CGGACCGACA GCACGGTGGC CGTGTCGGAC
GTGGCGCTGG ATGCCGAGGG CAGCAGCTTC ACCGTCACCA TCGACGGACG GTCCGTCCCC
GTACGCCTGA ACGCCCCGGG CCGCCACCTG GTCCGCAACG CCGCCACGGC GCTGGCGGCG
GTGGCCGCCC TGGGCGCCGA CATCGCGACC GCCGCCACGG CGCTGGCGGA TTTCCGGCCC
GGCGCCGGGC GCGGCGCGCT GAAGCCGATC CTGGGCGGCC GCGCCGCCCT GCTGGATGAA
AGCTACAACG CCTCGGTCCT GTCCGTCCGC TCGTCCCTGG CGGTGCTGGG GCTGCTGCCC
GCGACACGGC GCATGGCCGT GCTGGGCGAT ATCCGCGAAC TCGGCGCCTT CGCGCGCGCC
GAACATGAAT CCCTCCTGTC CGCCGTGCTG GCGCATGCGG ACCTCGTCTT CTGCTCCGGC
CCCGATATGA AATATCTGTT CGACCTGCTT CCCCCCTCCC GACGCGGCGC ATGGGCGCCG
GACGCCGCCA GCCTGGCGCC GCTGGTGCGC GATGCCGTGG CCCAGGACGA CGTGATCCTG
GTCAAGGGCA GCTTCGGCAG CCGCATGCGC GATGTCGTCG CGGTGCTGAC CGCGCCCGCG
ACGGCACCCT CCAAGGCGGG TGCGGCCTGA
|
|---|
| Protein sequence | MTVLWTRAAL QDATGGTFTG QAPVAVTGVS IDTRTLAPGD LFIALAGENS DGHAHVRAAL
DQGAAAAMIH DPTVLGTDSD DPRLLRVPDT MAALNALGRY ARTRFTGRMV AVTGSVGKTT
TKEMLRLALG AIGPTHCAAA SYNNHWGVPL TLARLPMDAA FCVCEVGMNH PGEIAPLAVM
VRPLVALVTT IAGAHLGHMG SLEAIAREKS DLIATLPPAG IAIVPDDATG QPIFAEQAAR
ARATLWRAGE RTDSTVAVSD VALDAEGSSF TVTIDGRSVP VRLNAPGRHL VRNAATALAA
VAALGADIAT AATALADFRP GAGRGALKPI LGGRAALLDE SYNASVLSVR SSLAVLGLLP
ATRRMAVLGD IRELGAFARA EHESLLSAVL AHADLVFCSG PDMKYLFDLL PPSRRGAWAP
DAASLAPLVR DAVAQDDVIL VKGSFGSRMR DVVAVLTAPA TAPSKAGAA
|
|---|
| |