Gene Gdia_3169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3169 
SymbolmurC 
ID6976607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3470500 
End bp3471942 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content70% 
IMG OID643392681 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_002277514 
Protein GI209545285 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.398374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCCC TGCCCCTATC CATCGGCACC ATCCACTTCG TCGGGATCGG CGGCATCGGC 
ATGTCCGGCA TTGCCGAGGT GCTGCACATG CTGGGCTATG CCGTGCAGGG TTCGGACATC
GCCGAGAACG CGAACGTGCA GCGCCTGCGC GCCGCCGGCA TCACGGTGGC GATCGGCCAT
GACGCCGCCA ACCTGGGCGC GGCGCAGGTC GTGGTGACAT CGACCGCCGT CCGCCGCGAC
AATCCGGAAG TGGTGGCCGC CCGCGCGCGG CTGATCCCCG TCGTCCGGCG GGCCGAGATG
CTGGCCGAGC TGATGCGCCT GCGCTGGGCC GTCGCGGTCG GCGGCACGCA CGGCAAGACC
ACGACCACCA GCCTGATCGC GGCGGTGCTG GAAGCGGCGC GCCTGGACCC CACGGTCATC
AATGGCGGCA TCATCGAGGC CTACGGCACC AACACCCGCA TGGGATCGGG CGACTGGATG
GTGGTCGAGG CCGACGAATC CGACGGATCG TTCCTGCGCC TGCCCTCGGT CATCACCGTC
GTGACCAACA TGGACCCCGA GCATCTGGAC CATTGGGGCA CCGCCGAGGC GATGCAGGCG
GCGTACGACC AGTTCGTCTC CAACATTCCG TTCTACGGCT TCGCGGTGCT GTGCATCGAC
CATCCGGCGG TGCAGCAGAT GATCCCGCGC CTGTCGGACC ACCGGATCGT GACCTATGGC
TTTTCGCCCC AGGCCGACAT CCGGGCCGAG AAGGTCATCA CCGACAAGCT GGGCGCGACG
TTCGAGGTCG TGGTGACCAA CCGCAACCGC AACCGCACGC GCCGCGCCGG TCCGTTCCGC
CTGCCGATGC TGGGCCACCA CAACGTGCAG AACGCGCTGG CCGCGATCGC CGTCGGGGTC
GAGATGGATA TCGACGACGC CACCCTGCGC TCGGCCTTCG CGGGATTCCG TGGGGTCAAG
CGCCGCTTCA CCCGCACCGG CGAGACCGGC GGCATCACCG TGATCGACGA TTACGGCCAC
CACCCGGTGG AAATCGCCGC CGTGCTGAAG GCCGCGCGCC AGGCCGGCGC GCGCGACGTC
ATCGCCGTGG TCCAGCCGCA CCGCTATTCC CGGCTGCAGA CGCTGTTCGG CGAATTCTGC
ACCTGCATGA ACGATGCCGG CACCGTCATC GTGGCCGACG TCTATGCCGC GGGCGAGGCC
CCGATCCCGG GTGTGGACCG CGACGCGCTG GTCGAGGGCC TGCGCGAGCG CGGCCACCGT
TCGGTGGTGC CGCTGCCCGA CCCGGAACAC CTGGCGGAAA TGGTCCACGC CATCGCCCGC
CCCGGCGACT TCGTCGTCTG CCTGGGGGCC GGCAGCATCA CCAACTGGGC GCAGGCCCTG
CCCGGCCAAC TGGCGGCGTT GCAGAACCCG GCCGCGGCGC GAAAGGGCGA ATGCGCGGCA
TGA
 
Protein sequence
MRALPLSIGT IHFVGIGGIG MSGIAEVLHM LGYAVQGSDI AENANVQRLR AAGITVAIGH 
DAANLGAAQV VVTSTAVRRD NPEVVAARAR LIPVVRRAEM LAELMRLRWA VAVGGTHGKT
TTTSLIAAVL EAARLDPTVI NGGIIEAYGT NTRMGSGDWM VVEADESDGS FLRLPSVITV
VTNMDPEHLD HWGTAEAMQA AYDQFVSNIP FYGFAVLCID HPAVQQMIPR LSDHRIVTYG
FSPQADIRAE KVITDKLGAT FEVVVTNRNR NRTRRAGPFR LPMLGHHNVQ NALAAIAVGV
EMDIDDATLR SAFAGFRGVK RRFTRTGETG GITVIDDYGH HPVEIAAVLK AARQAGARDV
IAVVQPHRYS RLQTLFGEFC TCMNDAGTVI VADVYAAGEA PIPGVDRDAL VEGLRERGHR
SVVPLPDPEH LAEMVHAIAR PGDFVVCLGA GSITNWAQAL PGQLAALQNP AAARKGECAA