| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3160 |
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| Symbol | |
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| ID | 6976598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 3457965 |
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| End bp | 3460091 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643392672 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_002277505 |
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| Protein GI | 209545276 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.780726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCG CACACGATCC CGCCCCCGAT CTCGCCAGGC TGGACCCGTC CGAACTGACC
GAACCCCAGG CCATGGTGGA ACTGGAGCGT CTGGCCCAGC AGATCCGCGC CCTGGACCGC
GCCTATTACG AGGACGACGC CCCCACCGTC ACCGACGCCG AATATGACGC GCTACGCCAG
CGCAACCTGG CGATCGAGGC CCGCTTCCCC GATCTGCGCC GCGCGGACAG CCCTTCGCTG
CACGTCAGCG GCGCGCCCTC CGCCGCGTTC GGCCGGCATC GCCACCTGGT GCCGATGCTC
TCGCTGGACA ACGTGTTCGG CCGCGAGGAT TTCGAATCCT TCGTGACCCG CGCCGCCCGC
TTCCTCGGCC TGAACGACGA TCAGGCCCGC GCCCTGCGCT TCGTCGCGGA ACCCAAGATC
GACGGCCTGT CGATCAGCCT GACCTACGAG CACGGCCGCT TCGTGCGCGG CACCACGCGC
GGCGACGGGA CGGAGGGCGA GGACGTCACC GCCAACCTGC GCACGCTGCG CGACGTGCCG
CTGCGGCTGA AGGGCCCGGC CCCCGCGCTG ATCGAAATCA GGGGCGAGGT CTTCCTGTCC
AAGCCCGCCT TCCTGTCGAT CAACGCCGCC CAGGCCGAAG CCGGACAGAA ACCCTTCGCC
AATCCGCGCA ATGCGGCGGC GGGGTCGCTG CGCCAGCTCG ATCCCAACAT CACCGCCCGC
CGGCCGCTGT CGCTGTTCGC CTATGCCCAG GGGTTTTCGT CGGACCGGGT GGCCGACACC
CACTGGGATT ATCTGGAGCG GCTGCGGCAG TGGGGATTCA CGGTCAATCC ACTGTCCTGC
GTCGTCGAAA GCGCCGAGGC GGCGGAAGCG TTCATGGATC GCATCGCCCG CGAACGCTCG
GGGCTGGAAT ACGATATCGA CGGCGTGGTC TATAAGGTCG ACGACCTGGC CCTGCAGGAC
CGGCTGGGCT TCGTCGGCCG GGCGCCGCGC TGGGCGATCG CGTGGAAGTT CCCCGCCGAA
CAGGCCATCA CCCGCCTGAC CCGGATCAAC ATCCAGGTCG GCCGCACGGG CGCGCTGACC
CCGGTGGCGA TCCTGGAACC GGTCAATGTC GGCGGCGTCA TCGTCACCCG TGCGACGTTG
CACAACGAGG ACGAGATCGC CCGCAAGGAC GTCCGCGTCG GCGACCTGGT CCAGATCCAG
CGCGCGGGCG ACGTCATTCC GCAGATCCTG GGCGTGGTGC CGCCCGGCGC GGATGCCCCG
CCGCGCGGCG AGGCGTTCAT CTTCCCCCAC ACCTGCCCGA TCTGCGGCGC CCGCGCCGAG
CGGCCGCCGG GCGAGGTGGT GTGGCGCTGT ACCGGCGGCC TGACCTGCCC GGCGCAGGTC
GTCGAACGGC TGATCCATTT CGTCTCGCGC GACGCGTTCG ACATCGACGG GCTGGGCGAA
CGCACGATCA CCGAATTCCA TGCCGACGGG CTGCTGAAGA CCCCGGCCGA CATCTTCCGC
CTGCCGGACC ACGAGGCCGA CATCGCGACG CGCGAGGGCT GGGGCACGGT CTCGGCCCGC
AACCTGACCG CGTCGGTCCG CGCCCGCCAG ACCATCCCGC TGGCGCGCTT CATCTACGCG
CTGGGCATCC GCCGCATCGG CACCAGCAAT GCACGCCTGC TGGCCCGGCA TTACGGATCG
TACACGCATT GGCGCGAACA GATGCTGCGC GCCACCACCA TCGGGTCCGA CGAACGGCTG
GCGCTGGGCT CGATCACCGG GATCGGCGGC GCCATCGCGG ACGAACTGGC CGCCTTCTTC
ATGGAGGCGC ACAATCTGGA AACCCTGGAC GACCTGACGG CGATGCTGAC GGCGATCGAG
GACGAGGACC TGCCGGCCCA GGGCCATCTG TCGGGCAAGA CCGTCGTCTT CACCGGCACA
CTGACGACCA TGACCCGGCC CGAGGCCAAG GCCATCGCCG AACGGCTGGG CGCCCGCGTC
ACCGACAGCG TCTCGAAGAA GACCGATCTG GTGGTGCTGG GCGCCGATGC GGGCTCCAAG
GCCCGCAAGG CCGCCGAACT GGGAATCGAC ACGCTGGATG AGGAAGGCTG GCGCGAACTG
GCCGGTATCG GCCCTGTCGG TCCGTAA
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| Protein sequence | MSRAHDPAPD LARLDPSELT EPQAMVELER LAQQIRALDR AYYEDDAPTV TDAEYDALRQ
RNLAIEARFP DLRRADSPSL HVSGAPSAAF GRHRHLVPML SLDNVFGRED FESFVTRAAR
FLGLNDDQAR ALRFVAEPKI DGLSISLTYE HGRFVRGTTR GDGTEGEDVT ANLRTLRDVP
LRLKGPAPAL IEIRGEVFLS KPAFLSINAA QAEAGQKPFA NPRNAAAGSL RQLDPNITAR
RPLSLFAYAQ GFSSDRVADT HWDYLERLRQ WGFTVNPLSC VVESAEAAEA FMDRIARERS
GLEYDIDGVV YKVDDLALQD RLGFVGRAPR WAIAWKFPAE QAITRLTRIN IQVGRTGALT
PVAILEPVNV GGVIVTRATL HNEDEIARKD VRVGDLVQIQ RAGDVIPQIL GVVPPGADAP
PRGEAFIFPH TCPICGARAE RPPGEVVWRC TGGLTCPAQV VERLIHFVSR DAFDIDGLGE
RTITEFHADG LLKTPADIFR LPDHEADIAT REGWGTVSAR NLTASVRARQ TIPLARFIYA
LGIRRIGTSN ARLLARHYGS YTHWREQMLR ATTIGSDERL ALGSITGIGG AIADELAAFF
MEAHNLETLD DLTAMLTAIE DEDLPAQGHL SGKTVVFTGT LTTMTRPEAK AIAERLGARV
TDSVSKKTDL VVLGADAGSK ARKAAELGID TLDEEGWREL AGIGPVGP
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