Gene Gdia_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3130 
Symbol 
ID6976564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand- 
Start bp3427975 
End bp3428631 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content69% 
IMG OID643392638 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_002277475 
Protein GI209545246 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0379301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.139192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC CGCACGGCGA CCCTGGGCAA AGCGACCTCG GCCCGCAGGC CCATCTGGGG 
CCGCTGATCG ATCTGGGCGC GGACCCCTTC GCCCTGTTCG CGGCATGGAT GCGCGACGCC 
GAGGCCGCGG AACCGGTCGA TCCCAACGCG ATGGCCCTGG CCACCGCCAC GCCGGACGGC 
CGCCCCTCGG TGCGGATGAT CCTGCTGAAG GGCGCGGACC GGCGGGGCTT CGTCTTCTAT 
ACCAACCTCG AAAGCCGCAA GGCCGGGGAA CTGACGGAAA ACCCGCACGC CGCGTTGCTG 
TTCCACTGGA AGAGCGTGGC GCGCCAGATC CGCATCGAGG GATCGGTCGA ACGCGTCAGC 
GACGCCGAGG CCGATGCCTA TTTCGCCAGC CGTTCGCGCA TGTCCCGACT GGGCGCCATC 
GCATCCGACC AGTCGCGCCC CCTACCCGAC CGCGCGATCT TCGAACATCG CCTGGCGGAC 
CTGGAAGAGC GCTACCCCGA CGGGGACGGC GCCATTCCGC GCCCGGCGAA CTGGTCGGGT 
TTCCGGCTGG TTCCGGACCG AATCGAGTTC TGGCAGAACC GCCCGCATCG GTTGCATGAT 
CGGGCCGTCT GGCGCCGCGC CGAAACGGGA TGGGAGACGA CGCGTCTCTA TCCCTAG
 
Protein sequence
MTTPHGDPGQ SDLGPQAHLG PLIDLGADPF ALFAAWMRDA EAAEPVDPNA MALATATPDG 
RPSVRMILLK GADRRGFVFY TNLESRKAGE LTENPHAALL FHWKSVARQI RIEGSVERVS 
DAEADAYFAS RSRMSRLGAI ASDQSRPLPD RAIFEHRLAD LEERYPDGDG AIPRPANWSG 
FRLVPDRIEF WQNRPHRLHD RAVWRRAETG WETTRLYP