Gene Gdia_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3116 
Symbol 
ID6976550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3412812 
End bp3413483 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID643392624 
Productouter membrane lipoprotein carrier protein LolA 
Protein accessionYP_002277461 
Protein GI209545232 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC CCAACTGCCT GTTTCCCCTG CCGACCGGTG TCGCATGCGC CCTGCTGGCG 
GGGCTTGCCT GTCTGCCGGC TTCCCTCCAT GCCCAGACGG TGACGACTCC CGCGCCCACG
GCCATGACGC TGGCCCTGGC CCCGGCCGAC CGGGCCTGGG TCCAGCGCGT CCAGGACTAC
CTGAACGGCG TGACGACGCT GGAGGCGCAG TTCCAGCAAC TGGCCCCCGA CGGCAAGCGC
ACGACCGGAA CGGCGTGGCT GAGCCGTCCG GGGCGGATGC GCTTCGAATA TGACAAGCCC
AGCCCGCTGC TTCTGGTGGC CAATCACGGC CAGGTCGTCT TCAACGACAG CCAGTTGGGC
CAGACCACGA CGCTGCCGCT GGACAAGACG CCGCTGGGGC TGCTGCTGCG GCCCGGGCTG
CAACTCTCGG GGGATGTGAC CGTTACGGGG TTCACACATT CCAACGGGTT GGTGCAGGTC
ACGCTGGTGC GGACGGCCTC GCCGGCGGAC GGGAGCCTGA CGCTGGTGTT TCATGACAGC
CCGATGTCCC TTCGGTCCTG GAGCGTCGTC GATGCCCAGG GGCAGGAAAC CAGGGTCGAT
CTGTACAATA TCCGCCTGGG CGGCGGCCCC TTGCCGGACG GGCTGTTCGA TACGGAAATT
GGCGAGCAAT AA
 
Protein sequence
MTRPNCLFPL PTGVACALLA GLACLPASLH AQTVTTPAPT AMTLALAPAD RAWVQRVQDY 
LNGVTTLEAQ FQQLAPDGKR TTGTAWLSRP GRMRFEYDKP SPLLLVANHG QVVFNDSQLG
QTTTLPLDKT PLGLLLRPGL QLSGDVTVTG FTHSNGLVQV TLVRTASPAD GSLTLVFHDS
PMSLRSWSVV DAQGQETRVD LYNIRLGGGP LPDGLFDTEI GEQ