Gene Gdia_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3092 
SymbolrplT 
ID6976526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3387026 
End bp3387385 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content64% 
IMG OID643392600 
Product50S ribosomal protein L20 
Protein accessionYP_002277437 
Protein GI209545208 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.907981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0375631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTG TTAAGCGGGG TGTGACCACC CACGCCCGTC ACAAGAAGGT TCTCGAGCAG 
TCCAAGGGCT TCCGCGGCCG CTCCTCGACC AATTATCGCA TTGCGCTGGA GCGCCTGGAA
AAGGCCCTGC GCTATGCCTA TCGCGACCGT CGCAACAAGA AGCGCGATTT CCGCGCGCTG
TGGATCCAGC GTATCAACGC CGCGGTCCGC GAGCACGGGC TGACCTACAG CAAGTTCATC
TTCGGCCTGG ACAAGGCCGG GATCGAAATC GACCGCAAGG TGCTGGCCGC CATCGCGTTC
GACGATGCCG CGACCTTCGC CGAGATCGTG AAGAAGGCCC AGGCCGCCCT GGCCGCCTGA
 
Protein sequence
MARVKRGVTT HARHKKVLEQ SKGFRGRSST NYRIALERLE KALRYAYRDR RNKKRDFRAL 
WIQRINAAVR EHGLTYSKFI FGLDKAGIEI DRKVLAAIAF DDAATFAEIV KKAQAALAA