Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3080 |
Symbol | |
ID | 6976514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3370362 |
End bp | 3372263 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643392588 |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_002277425 |
Protein GI | 209545196 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00766415 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGGCG GCGCGTCCCA GGCCGCCGCA TCGCGGGCGG TCCCGCCGCA GGAGGGGCCG GCACGGCCGG CGCTGCTGCT GGTCGAGGAT TCCGATACCC AGGCGCTGCG CATCCGGCGG ATGCTGGAAA GCCACGGCTT CGCCGTGACC CGGGTGGCCA GCGGCGAGGC CGCGCTGGAT TCCCTGGACG GGCGGATTCC CGACCTGGTG GTGGCCGATT ATCACCTGCC GGGCATGAAT GGCGGGCAGA TGGCCCGGCA ACTGCGCATG AGCGCGGTCA CGCGCATGAT TCCCGTCCTG ATGCTGACCG AGGGCGGCGA GCCGGGGCTG GAGCGCGAGG GGCTGGAAAG CGGCGCCGAT GCCTATGTGC CCAAATCGGC CGACCCGGAC CTGATCGTCT TTCGCATCCG CGCGCTGCTG CGCGAGGGCG CGGGCGCGCT GCTGCGTGAC GGCGCGGGGG CGCGCGACGG CATGTTCCGC CGGGCGCGTA TCCTGATCGT GGGCGGCGAC GGGACGCGTG ACCGTGACGT GACGTCGCTG GCGGCCCTGA TGCGCAGCGA CGGGCACGAG GTCACGGTGG CCCACCAGCC GATGTCGATG GACCGGCAGG ACTGGTTCGA AGCGGCGCGC GAACCCGACT GCGTGGTCGT GGACCTGGTG TCCGACGCCT TCGACGGCAT CGCCTTCTGC CGCGAACTGG ACGATGTGCG GCAGGAGGTC GTGGTGGCGG GCGGCGTGCC GCCCCGCATC CTGGGGCTGA GCGGCGGGCA GGCGCTGCGG GGCGTGTTCT CGGCCCGGGC GTTCGAGGCC GGGGTGGACG ACCTGGTGGC CGACGATGTC GAGCCCGACG TGCTGGCGCT GCGCATCCGC GCGCTGGTGC GGCGCAAGCT GCTGCAGGAC GAGGCGCGGC GCGTGGACCA GGAACGGCAG GCGCGCGAGA TCGCGGTGGA GACCGCGCGG GCCGAGGCGG CGTCCATCGC GTCCAAGGCC TCGCTGGCCG AGGCGCTGGA ACAGGCCAAC GCCGAACTGG CCGATGCCAA CCGCAAGCTG ATCGAAACCC AGGGCAAGCT GATCCAGACC GCCAAGATGG CCTCGCTGGG CGAACTGGTG GCCGGCATCG CGCACGAGAT CAACAATCCG CTGGCCTTCA TCCTGGCGCA CAAGGACACG GTCGCCCGCC TGCTGGCGCG GGTGATCGCG GATGAGGAAC GCGATGCGGC GCCGGCGGAT GCCGGGCATC ATGCCGCGCT GATGAAATGC CGCGATCGCG TCGAATCGAT GAACCTGGGG TTGCGGCGAA TCCAGAACCT GGTGCTGAAC CTGCGCAAGT TCTCGCGCCT GGAAGAAGGC CAGTTCCAGG TCATCGACGT GCCGGAGGCG CTGGAGACGG TGCTGGCGCT GCTGGGGCAG AAATTCGGCA GCGAGATCGT GGTGGAACGG GATTATCGCG CGCCCGACCG GCTGTATTGC CAGTCGGCGC TGCTCAACCA GGTGCTTATG AACATCATCA GTAACGCCGC CGACGCGATA CAGTCCATGA GCGACGCGGG ACCCGCGCGG GGCATGATCC GGATCGGCAC CGAACTGCGC GACGGCGAGG CGGGGCGGAC CTATGTCTTC ACCGTGATGG ATAACGGGCC GGGGATTCCG CCGGACCTGA AGGAGCGGAT CTTCGAGCCG TTCTTCACCA CCAAGCCGGT CGGCGCGGGC ACCGGGCTGG GGCTGGCCAT CGCCTATGGC GTCGTGCAGG CCCATCGCGG CACGATCTCG ATCACCGATG CGCCGCGTTC GGCCGACGGG GCGGCCGCCG GCGGGACGGT CTTCACCGTG TCCGTGCCGT GGCAGCCGCA TCTGGCGGCC ATGGCCGATT CCACCGCCCT GCCGGCGGGA GAACACGCAT GA
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Protein sequence | MTGGASQAAA SRAVPPQEGP ARPALLLVED SDTQALRIRR MLESHGFAVT RVASGEAALD SLDGRIPDLV VADYHLPGMN GGQMARQLRM SAVTRMIPVL MLTEGGEPGL EREGLESGAD AYVPKSADPD LIVFRIRALL REGAGALLRD GAGARDGMFR RARILIVGGD GTRDRDVTSL AALMRSDGHE VTVAHQPMSM DRQDWFEAAR EPDCVVVDLV SDAFDGIAFC RELDDVRQEV VVAGGVPPRI LGLSGGQALR GVFSARAFEA GVDDLVADDV EPDVLALRIR ALVRRKLLQD EARRVDQERQ AREIAVETAR AEAASIASKA SLAEALEQAN AELADANRKL IETQGKLIQT AKMASLGELV AGIAHEINNP LAFILAHKDT VARLLARVIA DEERDAAPAD AGHHAALMKC RDRVESMNLG LRRIQNLVLN LRKFSRLEEG QFQVIDVPEA LETVLALLGQ KFGSEIVVER DYRAPDRLYC QSALLNQVLM NIISNAADAI QSMSDAGPAR GMIRIGTELR DGEAGRTYVF TVMDNGPGIP PDLKERIFEP FFTTKPVGAG TGLGLAIAYG VVQAHRGTIS ITDAPRSADG AAAGGTVFTV SVPWQPHLAA MADSTALPAG EHA
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