Gene Gdia_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3065 
Symbol 
ID6976499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3354401 
End bp3355144 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content70% 
IMG OID643392573 
Productacetoacetyl-CoA reductase 
Protein accessionYP_002277410 
Protein GI209545181 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000577101 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0493909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCTG CCCCGGACCC GACACCGCGC GTGGCCTTGG TGACAGGCGG CACGCGCGGC 
ATCGGCGCGG CCGTCAGCCG CGCCCTTCGC GACGCCGGCC GCCGGGTCGT GGCGACCTAC
GGCACGAATG TCGAACAGGC CCGCCATTTC GAAGCCGAGA CCGGCATCCG CGCCGTTGCC
TTCGACGTCG CGGATCTGGA AGCCTGCGCC GACGCCCTGG CGCGGATCGC GGAACGGGAC
GGCCCGGTCA CCATCCTGGT CAACAATGCC GGCATCACCC GCGATTCCAC CATCGGCCGC
ATGACCCGCG CCGCCTGGGA CGACGTCATC GACACCAACC TGGGCGGGGC CTTCAATCTG
TGCCACCTGG CCATGCCCGC CATGCGGGCC CAGGGATTCG GCCGCATCGT CAACATGGCC
AGCATCAACG GCCAGACCGG CCAGTTCGGC CAGGCGAACT ACGCCGCGTC CAAGGCCGGG
CTGCAGGGCC TGACCCGCGC CCTGGCGCTG GAAGGCGCGC GCCACAACAT CACGGTCAAC
ACCGTGGCGC CCGGCTATAT CGACACCGCC ATGCTGGAAA CGGTGCCGCC GCATATCCTG
ACCGGCATCA TCGACCGCAT CCCGGTCGGG CGGCTGGGCA CGCCCGAGGA CGTGGCCCGT
GCGGTGACGT TCCTGACGGC GGACGAAGCC GGGTTCATCA CCGGCTCCAC CCTGTCGGTC
AACGGCGGCC AGCACATGCC CTGA
 
Protein sequence
MIPAPDPTPR VALVTGGTRG IGAAVSRALR DAGRRVVATY GTNVEQARHF EAETGIRAVA 
FDVADLEACA DALARIAERD GPVTILVNNA GITRDSTIGR MTRAAWDDVI DTNLGGAFNL
CHLAMPAMRA QGFGRIVNMA SINGQTGQFG QANYAASKAG LQGLTRALAL EGARHNITVN
TVAPGYIDTA MLETVPPHIL TGIIDRIPVG RLGTPEDVAR AVTFLTADEA GFITGSTLSV
NGGQHMP