Gene Gdia_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3060 
Symbol 
ID6976494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3350604 
End bp3351104 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content76% 
IMG OID643392568 
ProductNADH ubiquinone oxidoreductase 20 kDa subunit 
Protein accessionYP_002277405 
Protein GI209545176 
COG category[C] Energy production and conversion 
COG ID[COG3260] Ni,Fe-hydrogenase III small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000471144 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.336978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGT TGCGCGCGAT CCTGGCGGGC CGGCGCCCGG CCGTTCGCCT GCCCGTCACG 
GGCGCGCGGC CGCTGGCGGT CTTTCATGTC GAGACCGGAG GGTGCGAGGG ATGCGCGATG
GAGGTCGCGG CGCTGGACGG GGCGGCCTAC GGCCTGCCGG CCACCGGGAT CGCGTTCGTG
GCGACGCCGC GCCTGGCGGA GGTGCTGCTG GTGACGGGTC CGCTGACGCG GGCCATGGCG
CCGGTGCTGG AAGCCGCCTG GCATGCCATG CCCGAGCCTC GGGCGCTGGT CGCGGTCGGG
GCCTGCGCGA TCGATGGCGG CCCGTTTCCC GAAAATTACG CCGTGCTGGG CGGGCTGGAA
GGCCGCGCCA CGCTGGATAT GACGGTGCCG GGCTGCCCGC CCTCGCCGGC GGCGATCCTG
GCCGGGCTGG CGCGGGTGCT GGAGCGCGAC GTCGCCGGTC AGGCCGGGGT GGCGGAATCC
GGGCTGTCGT CCTCGGTCTG A
 
Protein sequence
MALLRAILAG RRPAVRLPVT GARPLAVFHV ETGGCEGCAM EVAALDGAAY GLPATGIAFV 
ATPRLAEVLL VTGPLTRAMA PVLEAAWHAM PEPRALVAVG ACAIDGGPFP ENYAVLGGLE
GRATLDMTVP GCPPSPAAIL AGLARVLERD VAGQAGVAES GLSSSV