| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3045 |
|---|
| Symbol | |
|---|
| ID | 6976479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 3333689 |
|---|
| End bp | 3334798 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643392553 |
|---|
| Product | permease YjgP/YjgQ family protein |
|---|
| Protein accession | YP_002277390 |
|---|
| Protein GI | 209545161 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.453296 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTTT CCGTCACCCT GTCCTTCTAT ATCGCCCGGC AGTTCACGCT GGCGGTCATG
GCGATGATCC TGTCGCTGAC GGGGCTGGTC TCGCTGTTCG ATTTCATCGA CCTGCTGCGC
CGCGTGGCCA CCCGGCCCGA CGTGCCGACC AGCCTGGCCA GCGAGATCGC GCTGCTGCAC
GTCCCCTATT TCATGATCGA GATCCTGCCC TTCGGCGTGC TGCTGGGCGG GATCGTGTGC
TTCTGGCGGC TGACCCGGTC GTCCGAGCTG ATCGTGGCGC GCGCGGCCGG GATTTCGGCC
TGGCAGTTCC TGACCGGCCC GCTGTCCTGC GCGCTGCTGA TCGGCATCCT GGCCACCGGG
GCCCTGTCGC CGCTGTCGTC CATCATGTAT CGCCAGGCGG AAACGCTGGA CCACGTCTAT
CTGCGCAGCG GCGGCCCGCT GAACCTGTCG GACGGCGCGC TGTGGCTGCG CCAGGCCGAT
TCCGGCCTGG TTCCCCACGG GGTCGCGATC CTGCATGCCC GCAGCGTCCA CCTGCAGGGC
GGGGTCCTGC GGATCGGCGG CATCAGCCTG TTCCGGCTGG ACGATACCGA CCATCTGATC
GTCCGGATCG AAGCCCCCGA GGGCTATCTC GGCCGGAAGG TCTGGATTTT CCAGGATGCC
AGGACGATCC GCCCCGACCG CCTGCCCGTC CCGGCGGGCC GGTTCGTCAT GCCGACCGAC
CTGACCGTTC CCCGCGTGCA GGAAAGCTTC GCCTCGCCCG ACACGCTGTC GGTCTGGGCG
CTGCCCGGCT TCATCGCCCT GCTGGAACGT TCGGGCTTTT CGTCCATCCG CCACCGGCTG
CATTTCCAGA CCCTGCTGAC ATTGCCCATC CTGGCCGGCA CCATGGCGCT GGTGGCGGCG
GGCTTTTCGA TGCGGCCGAC GCGGCGCGGC GGCGTCGCGC GCATGATCGG CAGCGGCGTC
GCCGCGGGGT TCGCCCTCTT CACGATCTCG AAGGTGGCCG CGCAATTCGG CGAATCCGGG
GCGATGCCGC CGCTGCTGGC CGCCTGGGCC CCGACCGGAG CAGGACTCTG CCTTGCAGTT
TCTCTGCTGC TTCATCTAGA AGACGGATGA
|
|---|
| Protein sequence | MTVSVTLSFY IARQFTLAVM AMILSLTGLV SLFDFIDLLR RVATRPDVPT SLASEIALLH
VPYFMIEILP FGVLLGGIVC FWRLTRSSEL IVARAAGISA WQFLTGPLSC ALLIGILATG
ALSPLSSIMY RQAETLDHVY LRSGGPLNLS DGALWLRQAD SGLVPHGVAI LHARSVHLQG
GVLRIGGISL FRLDDTDHLI VRIEAPEGYL GRKVWIFQDA RTIRPDRLPV PAGRFVMPTD
LTVPRVQESF ASPDTLSVWA LPGFIALLER SGFSSIRHRL HFQTLLTLPI LAGTMALVAA
GFSMRPTRRG GVARMIGSGV AAGFALFTIS KVAAQFGESG AMPPLLAAWA PTGAGLCLAV
SLLLHLEDG
|
|---|
| |