| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3034 |
|---|
| Symbol | |
|---|
| ID | 6976468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3321464 |
|---|
| End bp | 3323323 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643392542 |
|---|
| Product | DNA primase |
|---|
| Protein accession | YP_002277379 |
|---|
| Protein GI | 209545150 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0358] DNA primase (bacterial type) |
|---|
| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.514313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0365839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCTCG ATCCCGCCTT TCTGGAGGAA TTGCGTGCCC GCACGCCGAT CGCCTCGGTG
ATCGGCCGCC GGACCAAGCT GGTCCGGTCG GGGAGGAACT GGAAGGCCTG CTGCCCCTTC
CATGGCGAGA AGACGCCGTC ATTCTACGTC TATGACGATC ATTTCCACTG CTTCGGCTGT
GGCGCGCATG GAGACGTCAT TTCCTTCGTG ATGCAGAGCG AGGGACGCTC CTTTCCCGAA
GCGGTCGCCG AACTGGCGGG CGAGGCGGGG CTGGAGGTGC CGCGCGCCAG CCCGCGGGAG
CGCGAGGCCG AGCAGCGCGC CCGGGGCCTG TCCGACGTGC TGGACCTGGT GCAGGCCGCC
TGGGTGCGCC GGCTGCATGC GCCCGAGGGC CGGGCGGGCC TGGCCTACCT GCGCGGGCGG
GGCCTGTCGG ACGAGACGAT CGCCGGCTTC GGGCTGGGCT GGTCCGGCGA CGGGCGGGGC
GGATTGCTGA ACGAGTTGGC GCCGCACGGG GTCACGCCCG AGATGCTGGC GCAGGCCGGG
CTGATGCGCG TGGACGAGGA CGGGCGCCCG AAGGGGGAAC TGTTCTTCAA CCGCGTGACC
TTCCCGATCC GCGACCGGCG GGGCAGCCTG GTCTCGTTCG GCGGGCGCAT CCTGGGGGAT
GGGCAGCCGA AATACCTCAA CGGGCCCGAG ACCGCGCTGT TTTCCAAGCG GCGGACCCTG
TTCGGCATGG ATCGCGCCCG GGCCGCGCTG CGCACCGCGC GGCCGCGCGG GGCGCCGCCG
GTCGAACTGG TGGTGGTCGA AGGCTACATG GACGTCATCG CCCTGCACCA GGCGGGGTTC
CCCGGCGCGG TCGCGCCATT GGGCACCGCC CTGACGTCGG AACAGATGGA GGCGCTGTGG
CAGATGGCGG CGGCCCCGAT CCTGTGCTTC GACGGCGACG GGGCAGGGCA GCGCGCGGCG
GTCAAGGCGG CGGAAACGGC GCTGCCGCTG CTGGATATCA ACCGCACCCT GCGCTTCTGC
GCCCTGCCGG AGGGCGAGGA CCCCGACAGC CTGCTGCGCG GGCAGGGAAG CGGCGCGGTG
GCGGCACTGC TGGAGGGCGC GCGGCCGATC GGCCACGTGC TGTTCGACCT GCTGACCCAG
GGGGTACGCG ACCCCGGGCC CGAGCAGCGC GCCGCGGTGC GCCGGCGCCT GGTCGAGGCG
GCGGCGCTGA TCGCGGACAA GGGGCTGGCG GCGGAATATC GCAGCACGCT GCTGGACCGC
TTCTTCGAGA CCTATCGCCG CCGTCCGGGC CAGGGGAAGC GTGCGGGCCA GGGCGGCCAG
CGCGGGGACG GCAGGCAGGC GGGCGTGTCG TGGCCGGCCG GGTCCGCCCC GGCGCCGTTC
GACGAAGCGG CCGCGGCGCA GGAGCGCATG CGCATCCTGA CCGCGATCCT GCTGCGCCAC
CCCCATATCC TGCCCGAGGT CGAGGACGCC TATTGCCGCC TGGACCTGCC GCCCGCCCTG
GCGCGGGTGC GGGCCGCGGT GATGGACCTG GCCGCGTCGG GCGACCTGAC GGATGCGAAG
GCGCTGGACC GGCGCCTGGA CGAGGGCGGC CTGGCGGAGG AACGGATGGC GGTGGTGGCC
GCCCGGCCGC TGCCGATGTC GCTGAGCGCG CCCGACGACC TGATGGCGGT CGACGTGGTG
CAGGAATGGT GGCATTTTTT TGCCTTGCTG AATGTCCGGC AGTTCGGCGA AGATATCCGC
CTGGACACCG AAAGCCTGTG CGCCGGCACG CTGGACGCGC GGTCGTGGGC CAGTTTGCGG
ACCCGGCTTC TGGCCTGGGA GGCGTTGCGG CGCGGGGATC TCACGCCCGG CGAAGGGTAA
|
|---|
| Protein sequence | MALDPAFLEE LRARTPIASV IGRRTKLVRS GRNWKACCPF HGEKTPSFYV YDDHFHCFGC
GAHGDVISFV MQSEGRSFPE AVAELAGEAG LEVPRASPRE REAEQRARGL SDVLDLVQAA
WVRRLHAPEG RAGLAYLRGR GLSDETIAGF GLGWSGDGRG GLLNELAPHG VTPEMLAQAG
LMRVDEDGRP KGELFFNRVT FPIRDRRGSL VSFGGRILGD GQPKYLNGPE TALFSKRRTL
FGMDRARAAL RTARPRGAPP VELVVVEGYM DVIALHQAGF PGAVAPLGTA LTSEQMEALW
QMAAAPILCF DGDGAGQRAA VKAAETALPL LDINRTLRFC ALPEGEDPDS LLRGQGSGAV
AALLEGARPI GHVLFDLLTQ GVRDPGPEQR AAVRRRLVEA AALIADKGLA AEYRSTLLDR
FFETYRRRPG QGKRAGQGGQ RGDGRQAGVS WPAGSAPAPF DEAAAAQERM RILTAILLRH
PHILPEVEDA YCRLDLPPAL ARVRAAVMDL AASGDLTDAK ALDRRLDEGG LAEERMAVVA
ARPLPMSLSA PDDLMAVDVV QEWWHFFALL NVRQFGEDIR LDTESLCAGT LDARSWASLR
TRLLAWEALR RGDLTPGEG
|
|---|
| |