Gene Gdia_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3020 
Symbol 
ID6976454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3307207 
End bp3307710 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content71% 
IMG OID643392528 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_002277365 
Protein GI209545136 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.614658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0272519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG CGGCGACCCT GCCCTATCGC CGCAATGTCG GCGCCATGCT GTTCAACGCC 
CGGGGCAAGA TCCTGATCGG CCGCCGCACC GACCAGCCGG GCGCCGGCGG CCCGCTGGAT
GGCGGCGTCT GGCAGTGCCC GCAGGGCGGC ATCGACGCCG ACGAGGACCC GGAAGAGGCG
GTGCTGCGCG AACTGCGCGA GGAAATCGGC ACCGACCGGG CCGTCATCAT GGGCGCGCGG
CCGGACTGGC TGACCTACGA CCTGCCCGCC GCGCTGATCG GCCGGGCGCT GGGCGGGCGC
TATCGCGGCC AGACGCAGAA ATGGTTCGCC CTGCGCTTCA CCGGGCAGGA TTCGGATATC
CGCCTGGACG ACCAGCAGCC GCCGGAATTC GATGCCTGGC AGTGGATCGA CCTGCCCAGC
CTGCCGGAGC GCAATGTCGG CTTCAAGCGC GACATCTACC GGACCCTGGT CCGCGACTTC
GCCCGCTTCA GCCAGCCTGC CTGA
 
Protein sequence
MTDAATLPYR RNVGAMLFNA RGKILIGRRT DQPGAGGPLD GGVWQCPQGG IDADEDPEEA 
VLRELREEIG TDRAVIMGAR PDWLTYDLPA ALIGRALGGR YRGQTQKWFA LRFTGQDSDI
RLDDQQPPEF DAWQWIDLPS LPERNVGFKR DIYRTLVRDF ARFSQPA