| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3017 |
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| Symbol | |
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| ID | 6976451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3304121 |
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| End bp | 3305212 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643392525 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002277362 |
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| Protein GI | 209545133 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.314834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGC AAGACGGCGC TACGCCGGGC AAGACGCCGG ACGACACGCG CAGGAAAAAA
TCCAATCCGA TGGTGCGGAT CGGCCTGATC GCCTTCGTCG CGGTCGTCGC CGTGGGGGCG
GGGGTGTACT GGTTCCTGAC CCGCAACGAT ATCGAGACCG ACGATGCCTT CACCGCCGGG
CGCGCGGTGA CGATCGCCCC GCATGTGCGC GGCTACGTCA CCGCCCTGCT GGTGAACGAC
AACCAGTTCG TGCATGCCGG CGACCTGCTG GCGAAGATCG ATGACCGCGA TTATCGCGCC
GCGCGCGACA ACGCGGCCGC GACGCTGGAC ATCGCCCGTG CCCAGGCGGC CGGCGCGCAG
TTCGGCCTGC TGGTCGCGCA GAAGGATTTC CCCGGCCGCC TGATCGCGGC GCAGGGACAG
TTGCTGTCCG CCCAGGCGCA GGAATTCAGG GCCGAGACCG ATTATCGCCG CCAGCACGCG
GTGGCCCGCG CGGCCACCAC GCAGCAGGAT ATCGACTACG CCACCGCCGC GCTGCAGGCC
GCCAAGGCCC AGGTGCTGCA GGCCCAGGGC AACCTGCAGG TGGCCGAGCC GGTGAAGGCC
AATATCTCGA ACACGCAGAC GCGGGTCGGC CAGTTCGACG CGCAGGTGAC GCAGGCGCAG
GCGCAACTGA CCCAGGCGGA ACTGAACCTG GGCTGGACCG AAATCCGGGC GCCGCATGAC
GGCTGGATTT CCCAGCGCAA TATCGAACGC GGCAGCTTCG TCAGCGAAGG CCAGTCGATC
TTCTCGATCG TCGAGCCCGA GGTCTGGGTG ATCGCGAACT ACAAGGAAAC GCAGGTCACC
CACATGCGGC CGGGGCAGAA GGTCGATATC GCGGTCGATG CCTATCCGTT CCTGAACCTG
CGGGGCCATG TGGATTCGAT CCAGCTCGGC ACGGGTGCCA CCTTCAGCGC CTTCCCGCCG
GAAAACGCCA CCGGCAATTA CGTGAAGATC GTCCAGCGCG TGCCGGTGAA GATCCTGATC
GACGAGGGGC TGCGCGCCGA CGTGCCGCTG TCGCTGGGCC TGTCGGTCGA GCCGACGGTC
TACACGAAGT GA
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| Protein sequence | MAEQDGATPG KTPDDTRRKK SNPMVRIGLI AFVAVVAVGA GVYWFLTRND IETDDAFTAG
RAVTIAPHVR GYVTALLVND NQFVHAGDLL AKIDDRDYRA ARDNAAATLD IARAQAAGAQ
FGLLVAQKDF PGRLIAAQGQ LLSAQAQEFR AETDYRRQHA VARAATTQQD IDYATAALQA
AKAQVLQAQG NLQVAEPVKA NISNTQTRVG QFDAQVTQAQ AQLTQAELNL GWTEIRAPHD
GWISQRNIER GSFVSEGQSI FSIVEPEVWV IANYKETQVT HMRPGQKVDI AVDAYPFLNL
RGHVDSIQLG TGATFSAFPP ENATGNYVKI VQRVPVKILI DEGLRADVPL SLGLSVEPTV
YTK
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