| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3007 |
|---|
| Symbol | rnhB |
|---|
| ID | 6976441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3290089 |
|---|
| End bp | 3290763 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643392515 |
|---|
| Product | ribonuclease HII |
|---|
| Protein accession | YP_002277352 |
|---|
| Protein GI | 209545123 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0164] Ribonuclease HII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.654478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.32816 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGATT ACACACGCGA GATGCAGCAT GGCGGCCGGG TCGCCGGGGT GGACGAAGTC
GGTCGCGGGC CGCTGGCGGG GCCGGTGGTG GCCGCCGCGG TGATGTTCGA TTCGGGCGTG
CCCCGGCGCC TTGCCACCCA GCTTGACGAT TCGAAGAAGC TGACCGAAGC GGCGCGGCTG
CGGGCCTATG CCGCGCTGCA TGCGGCGCGG GGGGTGCATA TCGCGGTCGC CGCGGCCTCG
GTTTCCGAAA TCGCGCGGCT GAATATCCTG CGTGCCGCCT TCCTGGCGAT GCGCCGCGCC
GTGGCGCGGC TGCCGCACCA GCCCGACATG GTGCTGGTGG ACGGCAATGC CGCGCCCGAT
TTCGGCTGTC CCGCGCAGTG CGTCGTCGGC GGCGACGGCG AAAGCCTGTC CATCGCCGCG
GCCTCGATCG TGGCCAAGGT GGTGCGCGAC CGGCTGATGG CGCGGCTGTC CTGCCGCTGG
CCGGGCTACG GGTGGGAGCG CAATGCCGGA TACGGCACCG CCGAGCATCG TGCGGCGCTG
TGCCGCGCGG GCACGACCCC CCATCATCGC GAAGCGTTCG GGCTGGTTCG GCAACTGACG
CTGGGGCTGG TGCCCGCGGC GGCGCCCGGG ATGGCGCCGG GACTGGTCCC CGCCGTCCTG
GAAGACGTGT CATGA
|
|---|
| Protein sequence | MPDYTREMQH GGRVAGVDEV GRGPLAGPVV AAAVMFDSGV PRRLATQLDD SKKLTEAARL
RAYAALHAAR GVHIAVAAAS VSEIARLNIL RAAFLAMRRA VARLPHQPDM VLVDGNAAPD
FGCPAQCVVG GDGESLSIAA ASIVAKVVRD RLMARLSCRW PGYGWERNAG YGTAEHRAAL
CRAGTTPHHR EAFGLVRQLT LGLVPAAAPG MAPGLVPAVL EDVS
|
|---|
| |