| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3005 |
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| Symbol | |
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| ID | 6976439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 3287955 |
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| End bp | 3289322 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643392513 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002277350 |
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| Protein GI | 209545121 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.568711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.749765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAACAC TGCCCCCGAA GCCGCTCACG CGGCACGACG CGCCCGACGC CAACTGGATT
GAGGAAGACC CGACGACCAT GGACAAACCG ACACGCGACC CTTCCGAAGC GCCCGCGCAT
GAGGCAGCCG GACGGCAGGG CGGGCCCCGG GGCGGATCAC GTCGCCGTCT GCTTCTCTGG
GGAACGGCGC TGGTCGGCGC GGCGGTGATC GCGGCGGCGT TCCTGCGGCC GCATACCGAC
GCCACCGGCG GCAGCGGCCG CCACGGCCAC CAGGCGGTCG GGGACGCGCA GCCCGTTGCC
GTGGCGACGG TCCATCCCGG CGACATGCCG ATCGAACTGA CCGAACTGGG CACCGTGGTG
CCGATCACGA ACGTCACGGT ACAGCCCCGC GTCGACGGCT ACCTGATGCA GGTCCTGTTC
ACCGAGGGCC AGCACGTGAA GAAGGGCGAC CTGCTGGCGC TGATCGATAC CCGGCCGTAC
GAGGTGGCGC TGGCGCAGTA CCAGGGCCAG CTGGCCTCGG ACATCGCGCA GCTCCAGCAG
GCGCGGGTGG ACAACGACCG CTACCAGCGC CTGGTCCGCC AGAACAGTAT CGCGACCCAG
ACCGCCCAGG ACCAGCAATA CAAGGTCGCG CAGCTCGAAG GCACCGTGAA GGTCGACCAG
GCCATGGTCG ACAACGAAAA ACTGCAGCTC GTGTACTGCC ACGTCATCGC CCCCGTGGAC
GGGCGCGTCG GCATCCGCCA GGTGGACATG GGCAACTACG TGACCGCCGG GCAGACCAAC
GGGCTGGTCA TCCTGACGCA AATGCAGCCG ATTTCGGTCA TCTTCACCCT GCCCGAAACC
GAACTGGGCG CGGTGGCCGA GCGGCTGCGC ACCGGCATCG CCCTGCCGGT CGCGGCCTGG
GACAGCACCA ACACGCGCAA GATCGCCGAC GGCACGGTCA GCGTGCTGGA CAGCCAGATC
GACACCTCGA CCGGCACGGT GCGCCTGCGC TCGATCTTCA CCAACCAGGA CGAAACCCTG
TTCCCGAACC AGTTCGTCAA CGCCCACCTG CTGGTCAACA CCCAGCATAA CGTGCTGCTG
GTGCCGACCA ACGCGGTCCA GACCGGGCCC AACGGACCGT TCACCTATGT CGTCAAGCCC
GACAACACGG TCGAGGTCCG CGACATCAAG ACCGGCGCCA CCCATGGCGA CGTGGTGGTC
GCGGCCTCGG GCCTGAAGGA TGGCGACGTG GTCGTGACCG ACGGCACCGA CCGCCTGCAT
GCGGGGTCGA AGGTCACCAT CCCGGCGGCG GCCGACACCA AGACGGGCGC CGATACCAAG
GCGGGCACGG ACAACGGGTC CCGTTCGGGC GCCCAGGGTC GGCAATGA
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| Protein sequence | MLTLPPKPLT RHDAPDANWI EEDPTTMDKP TRDPSEAPAH EAAGRQGGPR GGSRRRLLLW
GTALVGAAVI AAAFLRPHTD ATGGSGRHGH QAVGDAQPVA VATVHPGDMP IELTELGTVV
PITNVTVQPR VDGYLMQVLF TEGQHVKKGD LLALIDTRPY EVALAQYQGQ LASDIAQLQQ
ARVDNDRYQR LVRQNSIATQ TAQDQQYKVA QLEGTVKVDQ AMVDNEKLQL VYCHVIAPVD
GRVGIRQVDM GNYVTAGQTN GLVILTQMQP ISVIFTLPET ELGAVAERLR TGIALPVAAW
DSTNTRKIAD GTVSVLDSQI DTSTGTVRLR SIFTNQDETL FPNQFVNAHL LVNTQHNVLL
VPTNAVQTGP NGPFTYVVKP DNTVEVRDIK TGATHGDVVV AASGLKDGDV VVTDGTDRLH
AGSKVTIPAA ADTKTGADTK AGTDNGSRSG AQGRQ
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