| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2998 |
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| Symbol | |
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| ID | 6976432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 3273561 |
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| End bp | 3275327 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643392506 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_002277343 |
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| Protein GI | 209545114 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5610] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.211302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTCCC ACCTGAAGCA GTCCATCGCA CGAGCCGACG CCGTCTCTTT CGATGTGTTC
GATACGCTGT TCGTCCGCCC GCTTGCCGAT CCGGAAGACC TCTTCGACAT CATCGGCGAG
AAATTCGGCA TCGCCTCCTT CCGCCGCCTG CGCCAGGAAG CGCAGGTACG GGCGTTCCAG
CGCATGCGGG AGAACGGACA GAAGGAAATC ACGCTCGACG GCATCTATGC GTGCTTCGAT
TCCGTGTCGG TGCCGGCATC CGTGCTGCGC GATGCCGAGT ACCAGCTCGA ACTCGCCCTG
ACGCTGCCCA ATCCCGATCT CATGGACGTG TTCAGGCAGA CGATCGCCGA TAAACCCGTC
GTCATCACGT CGGATATGTA CCTGCCGCAA GCCTTCTTCG ACGATCTTTT CCACAAGCAC
CGGCTGCAGC CCAGCGCGAC CTTCATTTCG TCGGAGCGAA ACGCAACCAA GCGCGATACC
GGTGAACTGT TCGACCGGGT GTCACAGGAA CTCGGCATAG ACCCGGGGCG CATCCTGCAT
ATCGGGGACA ATCCGCTGTC GGACGTGGAA CGGGCCAGGC AAAAAGGCCT GTCCGCCTAT
CATTACGTCG ATCCCACACG ACAGCAGAAA TCCAGTCGCT TTCCCCCGTC GGCATCGATC
GCCGGCAGCC TCATCCGCTC GATCGCCGAT CGGCCGCCGC CGGGATCGTT TACCGAACTC
GGGTTTCGTT TCGGCGGGCC GGCGGCAGTG GGCTTCCTCG ACTGGATTGT CCGCAAATCA
GCGCAGGACA AGATCGACAT CGTGCTGTTC GTATCGCGAG ACGGATATGT TCTTGAACGC
CTCGCCCGCA CGATGCCCGC GGGGACCTTG CCGCGTTTCA CCTATTTCAT GGGCTCGCGC
GTCGCCTTTA CGCTCGCCGC CACCGACGAG TCCAACTTCA ATACGCAGAT GGAATTCTTC
CTTGCGGGCG CACATGGATT GCGGCCGATC GAGGTGCTGG AGCGGCTGGG CGTCACGCCA
CCGGCCGACC GGGTGATGGA TGACCTCGGC CTCGGAGCCG GAATCGTCAT CAGCAATGAC
AATATCAGCC GCATCCGGGA TTTCGTGGGC GCCTTCCGCG GAGACATCCT GCAGGTATGC
CGTCGCAACC GGCGCGGCCT CCTCAACTAC CTCAAACAGG TGGGCGTTGA ACCGGGCATG
CGCGTCGCCA TGGTCGATGT GGGCTGGAAC GGAACGACGC AGGATGCCTT CGACCTCGCC
CTCGGCAAGC TGATGCAGGT CGAACTGTTC GGCTACTACC TGTGCCTGAA CGAATCGGAT
GATTGCCGGC GGCGGCGGCA AAGACTGAGG ATGGACGCCC TGCTGTCGCG CGAATCAATC
GGCCCGGAAC GGGTAACCGC CGTTTATGCC AATCGTGTCG CCGTCGAACT GTTCTTCTCG
GCACCCCATG ACGCCGTCAT CGGCTACCAG GATGCGATTG GAAAGGATGT CGCCATCATC
GAGGATTCCG GGCGAATTGC CATTGATGGC CATGCCCGAA TTTCGACGGA GATCACGGAC
GGCATCGAAC AGTTCGCGCT GACATTCCGT AATCTTTGCG CCGAGATCGG CCTTGTTGCC
GATCCGCTGG CGACTGCACT GCCGGTTGTG GACTTTGTCG AATCGATTGA CGCGGAAACG
CGCGGCTTAC TGGCGTCCGT CGAAAATTTC GATGCATGGG GCAGTACGCG AAACCAGCGC
GTCGCGCTGA CGACATACCT GCCGTAA
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| Protein sequence | MVSHLKQSIA RADAVSFDVF DTLFVRPLAD PEDLFDIIGE KFGIASFRRL RQEAQVRAFQ
RMRENGQKEI TLDGIYACFD SVSVPASVLR DAEYQLELAL TLPNPDLMDV FRQTIADKPV
VITSDMYLPQ AFFDDLFHKH RLQPSATFIS SERNATKRDT GELFDRVSQE LGIDPGRILH
IGDNPLSDVE RARQKGLSAY HYVDPTRQQK SSRFPPSASI AGSLIRSIAD RPPPGSFTEL
GFRFGGPAAV GFLDWIVRKS AQDKIDIVLF VSRDGYVLER LARTMPAGTL PRFTYFMGSR
VAFTLAATDE SNFNTQMEFF LAGAHGLRPI EVLERLGVTP PADRVMDDLG LGAGIVISND
NISRIRDFVG AFRGDILQVC RRNRRGLLNY LKQVGVEPGM RVAMVDVGWN GTTQDAFDLA
LGKLMQVELF GYYLCLNESD DCRRRRQRLR MDALLSRESI GPERVTAVYA NRVAVELFFS
APHDAVIGYQ DAIGKDVAII EDSGRIAIDG HARISTEITD GIEQFALTFR NLCAEIGLVA
DPLATALPVV DFVESIDAET RGLLASVENF DAWGSTRNQR VALTTYLP
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