Gene Gdia_2988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2988 
SymbolrpsM 
ID6976422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3264029 
End bp3264406 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content63% 
IMG OID643392496 
Product30S ribosomal protein S13 
Protein accessionYP_002277333 
Protein GI209545104 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.24286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCGTA TTGCCGGCGT GAACATCCCA ACCAACAAGC GGGTGACGAT TGGCCTGCGT 
TATATCTATG GCATCGGCGA GACGAAGGCT GAGGAAATCT GCCGTCGTCT CGAGATCCCG
GCCGAGCGCC GGGTCAACGA GCTGTCCGAC GACGAGATCC TTAAGATCCG CGAACTGATC
GACAGCGAGT ATCGGGTCGA AGGCGATCTG CGTCGCGAAG TCGCGATGAA CATCAAGCGT
CTGATGGACC TGGGCTGCTA CCGCGGCCTG CGCCATCGTC GCGGCCTGCC GGTTCGTGGT
CAGCGGACCC ACACCAACGC CCGCACCCGC AAGGGCAAGG CCGTTGCGAT CGCCGGCAAG
AAGAAGGCTA CCCGCTAA
 
Protein sequence
MARIAGVNIP TNKRVTIGLR YIYGIGETKA EEICRRLEIP AERRVNELSD DEILKIRELI 
DSEYRVEGDL RREVAMNIKR LMDLGCYRGL RHRRGLPVRG QRTHTNARTR KGKAVAIAGK
KKATR